Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ELR50_RS14165 | Genome accession | NZ_CP034688 |
| Coordinates | 3177464..3177961 (-) | Length | 165 a.a. |
| NCBI ID | WP_009617188.1 | Uniprot ID | A0A127MME3 |
| Organism | Pseudomonas citronellolis strain WXP-4 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3172464..3182961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELR50_RS14145 (ELR50_14055) | - | 3173349..3173786 (+) | 438 | WP_058071802.1 | RidA family protein | - |
| ELR50_RS14150 (ELR50_14060) | - | 3173783..3174739 (+) | 957 | WP_058071803.1 | PDR/VanB family oxidoreductase | - |
| ELR50_RS14155 (ELR50_14065) | - | 3175096..3176331 (+) | 1236 | WP_269964189.1 | hypothetical protein | - |
| ELR50_RS14160 (ELR50_14070) | - | 3176375..3176572 (-) | 198 | WP_269964190.1 | hypothetical protein | - |
| ELR50_RS14165 (ELR50_14075) | ssb | 3177464..3177961 (-) | 498 | WP_009617188.1 | single-stranded DNA-binding protein | Machinery gene |
| ELR50_RS14170 (ELR50_14080) | - | 3177980..3179368 (-) | 1389 | WP_058488427.1 | MFS transporter | - |
| ELR50_RS14175 (ELR50_14085) | uvrA | 3179580..3182435 (+) | 2856 | WP_009617186.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 18229.15 Da Isoelectric Point: 5.2781
>NTDB_id=332543 ELR50_RS14165 WP_009617188.1 3177464..3177961(-) (ssb) [Pseudomonas citronellolis strain WXP-4]
MARGVNKVILVGNVGGDPETRYLPNGNAVTNVTLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIVAEYVRKGSQIYVE
GSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPGAGGDDAPRAPREPQQRPQQAPRPAPQQQAAPAPQPAADYDSFD
DDIPF
MARGVNKVILVGNVGGDPETRYLPNGNAVTNVTLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIVAEYVRKGSQIYVE
GSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPGAGGDDAPRAPREPQQRPQQAPRPAPQQQAAPAPQPAADYDSFD
DDIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=332543 ELR50_RS14165 WP_009617188.1 3177464..3177961(-) (ssb) [Pseudomonas citronellolis strain WXP-4]
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGCGATCCGGAAACCCGCTACCTGCCCAACGGCAA
CGCGGTGACCAACGTCACCCTGGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAGCAGGAACGTACCGAAT
GGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGTCGCCGAGTACGTGCGCAAGGGCTCGCAGATCTACGTCGAA
GGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGACCGCTACACCACCGAGATCGTGGTAGACATCAACGG
TAACATGCAACTGCTCGGCGGCCGTCCGGGCGCCGGTGGCGACGACGCCCCGCGCGCGCCGCGCGAACCCCAGCAGCGCC
CGCAACAGGCCCCGCGCCCGGCGCCGCAACAACAGGCCGCCCCGGCTCCGCAGCCGGCCGCCGACTACGACAGCTTCGAC
GACGACATTCCGTTCTAA
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGCGATCCGGAAACCCGCTACCTGCCCAACGGCAA
CGCGGTGACCAACGTCACCCTGGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAGCAGGAACGTACCGAAT
GGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGTCGCCGAGTACGTGCGCAAGGGCTCGCAGATCTACGTCGAA
GGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGACCGCTACACCACCGAGATCGTGGTAGACATCAACGG
TAACATGCAACTGCTCGGCGGCCGTCCGGGCGCCGGTGGCGACGACGCCCCGCGCGCGCCGCGCGAACCCCAGCAGCGCC
CGCAACAGGCCCCGCGCCCGGCGCCGCAACAACAGGCCGCCCCGGCTCCGCAGCCGGCCGCCGACTACGACAGCTTCGAC
GACGACATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.571 |
100 |
0.6 |
| ssb | Glaesserella parasuis strain SC1401 |
49.727 |
100 |
0.552 |
| ssb | Neisseria gonorrhoeae MS11 |
46.023 |
100 |
0.491 |
| ssb | Neisseria meningitidis MC58 |
46.023 |
100 |
0.491 |