Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DYL72_RS09425 | Genome accession | NZ_CP034672 |
| Coordinates | 1966034..1966564 (+) | Length | 176 a.a. |
| NCBI ID | WP_019282036.1 | Uniprot ID | A0A233HL27 |
| Organism | Vibrio anguillarum strain J360 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1961034..1971564
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYL72_RS09410 (DYL72_09410) | uvrA | 1961123..1963945 (-) | 2823 | WP_026029161.1 | excinuclease ABC subunit UvrA | - |
| DYL72_RS09415 (DYL72_09415) | galU | 1964114..1964983 (-) | 870 | WP_019282038.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| DYL72_RS09420 (DYL72_09420) | qstR | 1965101..1965748 (-) | 648 | WP_029388192.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| DYL72_RS09425 (DYL72_09425) | ssb | 1966034..1966564 (+) | 531 | WP_019282036.1 | single-stranded DNA-binding protein | Machinery gene |
| DYL72_RS09430 (DYL72_09430) | csrD | 1966694..1968682 (+) | 1989 | WP_029388191.1 | RNase E specificity factor CsrD | - |
| DYL72_RS09435 (DYL72_09435) | - | 1968695..1970137 (+) | 1443 | WP_019282034.1 | hypothetical protein | - |
| DYL72_RS09440 (DYL72_09440) | gspM | 1970134..1970778 (+) | 645 | WP_019282033.1 | type II secretion system protein GspM | - |
| DYL72_RS09445 (DYL72_09445) | - | 1970768..1971094 (+) | 327 | WP_017043833.1 | MSHA biogenesis protein MshK | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19331.48 Da Isoelectric Point: 5.2257
>NTDB_id=332377 DYL72_RS09425 WP_019282036.1 1966034..1966564(+) (ssb) [Vibrio anguillarum strain J360]
MASRGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMPQQQQQGGGWGQPQQPAMQKQPQQQSAPQQAQ
PQYNEPPMDFDDDIPF
MASRGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMPQQQQQGGGWGQPQQPAMQKQPQQQSAPQQAQ
PQYNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=332377 DYL72_RS09425 WP_019282036.1 1966034..1966564(+) (ssb) [Vibrio anguillarum strain J360]
ATGGCAAGCCGTGGAGTAAATAAAGTTATTTTAGTGGGTAACCTAGGTAACGACCCAGAAATTCGTTATATGCCTGGTGG
CGCTGCTGTGGCAAATATCACCATTGCAACGTCAGATTCATGGCGTGATAAAGCAACTGGCGAGCAACGCGAAAAAACCG
AATGGCACCGTGTTGCGCTGTTTGGCAAATTAGCCGAAGTTGCTGGTGAATACTTACGTAAAGGTTCACAAGTGTACATT
GAAGGCCAGCTACAAACTCGTAAGTGGCAAGATCAAAGCGGACAAGATCGTTATACCACCGAAGTTGTCGTACAAGGTTT
TAATGGTGTGATGCAAATGTTGGGTGGCCGTGCTCAGGGTGGTGCTCCAGCGCAAGGTGGAATGCCACAACAACAGCAAC
AAGGTGGCGGATGGGGGCAACCTCAGCAGCCTGCGATGCAAAAGCAACCACAGCAACAGTCAGCTCCTCAACAGGCTCAA
CCTCAGTATAATGAACCACCAATGGATTTTGATGACGACATCCCATTCTAA
ATGGCAAGCCGTGGAGTAAATAAAGTTATTTTAGTGGGTAACCTAGGTAACGACCCAGAAATTCGTTATATGCCTGGTGG
CGCTGCTGTGGCAAATATCACCATTGCAACGTCAGATTCATGGCGTGATAAAGCAACTGGCGAGCAACGCGAAAAAACCG
AATGGCACCGTGTTGCGCTGTTTGGCAAATTAGCCGAAGTTGCTGGTGAATACTTACGTAAAGGTTCACAAGTGTACATT
GAAGGCCAGCTACAAACTCGTAAGTGGCAAGATCAAAGCGGACAAGATCGTTATACCACCGAAGTTGTCGTACAAGGTTT
TAATGGTGTGATGCAAATGTTGGGTGGCCGTGCTCAGGGTGGTGCTCCAGCGCAAGGTGGAATGCCACAACAACAGCAAC
AAGGTGGCGGATGGGGGCAACCTCAGCAGCCTGCGATGCAAAAGCAACCACAGCAACAGTCAGCTCCTCAACAGGCTCAA
CCTCAGTATAATGAACCACCAATGGATTTTGATGACGACATCCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
85.393 |
100 |
0.864 |
| ssb | Glaesserella parasuis strain SC1401 |
54.737 |
100 |
0.591 |
| ssb | Neisseria gonorrhoeae MS11 |
45.556 |
100 |
0.466 |
| ssb | Neisseria meningitidis MC58 |
45 |
100 |
0.46 |