Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EHW89_RS07685 | Genome accession | NZ_CP034543 |
| Coordinates | 1576957..1577448 (-) | Length | 163 a.a. |
| NCBI ID | WP_003026323.1 | Uniprot ID | I0SA12 |
| Organism | Streptococcus periodonticum strain KCOM 2412 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1571957..1582448
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHW89_RS07670 (EHW89_07670) | - | 1574863..1575807 (+) | 945 | WP_003030529.1 | magnesium transporter CorA family protein | - |
| EHW89_RS07675 (EHW89_07675) | - | 1575823..1576500 (+) | 678 | WP_126467675.1 | DUF1129 domain-containing protein | - |
| EHW89_RS07680 (EHW89_07680) | rpsR | 1576681..1576920 (-) | 240 | WP_000068664.1 | 30S ribosomal protein S18 | - |
| EHW89_RS07685 (EHW89_07685) | ssb | 1576957..1577448 (-) | 492 | WP_003026323.1 | single-stranded DNA-binding protein | Machinery gene |
| EHW89_RS07690 (EHW89_07690) | rpsF | 1577460..1577750 (-) | 291 | WP_126467677.1 | 30S ribosomal protein S6 | - |
| EHW89_RS07695 (EHW89_07695) | - | 1578019..1579062 (+) | 1044 | WP_126467679.1 | bifunctional glycosyltransferase family 2/GtrA family protein | - |
| EHW89_RS07700 (EHW89_07700) | - | 1579059..1579964 (+) | 906 | WP_126467681.1 | phosphodiester glycosidase family protein | - |
| EHW89_RS07705 (EHW89_07705) | - | 1579939..1580349 (+) | 411 | WP_126467683.1 | hypothetical protein | - |
| EHW89_RS07710 (EHW89_07710) | - | 1580585..1581187 (-) | 603 | WP_106383961.1 | histidine phosphatase family protein | - |
| EHW89_RS07715 (EHW89_07715) | - | 1581184..1581777 (-) | 594 | WP_126467684.1 | histidine phosphatase family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18203.89 Da Isoelectric Point: 4.9008
>NTDB_id=331800 EHW89_RS07685 WP_003026323.1 1576957..1577448(-) (ssb) [Streptococcus periodonticum strain KCOM 2412]
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRASREGQSSGGYTSNNFGNSSSNFGNSTSANQVPNFSRDENPFGNTNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRASREGQSSGGYTSNNFGNSSSNFGNSTSANQVPNFSRDENPFGNTNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=331800 EHW89_RS07685 WP_003026323.1 1576957..1577448(-) (ssb) [Streptococcus periodonticum strain KCOM 2412]
ATGATAAATAACGTTGTACTTGTGGGTCGGATGACCCGAGATGCCGAACTTCGCTATACTCCGCAAAATCAAGCGGTCGC
AACTTTTACTCTTGCTGTCAATCGCAACTTTAAAAATCAAAGTGGCGAGAGAGAAGCAGATTTCATTAACGTTGTAATTT
GGCGCCAGCAGGCAGAAAATCTTGCAAATTGGGCTAAAAAAGGAGCTCTCATCGGAATTACTGGTCGGATTCAGACACGT
AACTACGAAAACCAGCAAGGTCAACGTGTCTATGTGACAGAAGTGGTAGCTGACAATTTCCAACTGCTAGAAAGTCGTGC
CAGCCGTGAAGGTCAATCTTCTGGTGGCTACACTTCTAATAATTTTGGAAATTCATCATCCAACTTTGGGAACTCAACTT
CTGCCAATCAAGTACCCAACTTTTCTCGTGATGAAAATCCATTTGGTAATACCAATCCAATGGACATCTCAGATGACGAT
CTACCATTTTAA
ATGATAAATAACGTTGTACTTGTGGGTCGGATGACCCGAGATGCCGAACTTCGCTATACTCCGCAAAATCAAGCGGTCGC
AACTTTTACTCTTGCTGTCAATCGCAACTTTAAAAATCAAAGTGGCGAGAGAGAAGCAGATTTCATTAACGTTGTAATTT
GGCGCCAGCAGGCAGAAAATCTTGCAAATTGGGCTAAAAAAGGAGCTCTCATCGGAATTACTGGTCGGATTCAGACACGT
AACTACGAAAACCAGCAAGGTCAACGTGTCTATGTGACAGAAGTGGTAGCTGACAATTTCCAACTGCTAGAAAGTCGTGC
CAGCCGTGAAGGTCAATCTTCTGGTGGCTACACTTCTAATAATTTTGGAAATTCATCATCCAACTTTGGGAACTCAACTT
CTGCCAATCAAGTACCCAACTTTTCTCGTGATGAAAATCCATTTGGTAATACCAATCCAATGGACATCTCAGATGACGAT
CTACCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.386 |
100 |
0.62 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.607 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.871 |
0.368 |