Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   EHW89_RS03225 Genome accession   NZ_CP034543
Coordinates   666769..667773 (+) Length   334 a.a.
NCBI ID   WP_126466667.1    Uniprot ID   A0A3Q9EXZ6
Organism   Streptococcus periodonticum strain KCOM 2412     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 661769..672773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHW89_RS03215 (EHW89_03215) - 662587..665052 (+) 2466 WP_126468051.1 LTA synthase family protein -
  EHW89_RS03220 (EHW89_03220) - 665422..666504 (-) 1083 WP_126466666.1 Xaa-Pro peptidase family protein -
  EHW89_RS03225 (EHW89_03225) ccpA 666769..667773 (+) 1005 WP_126466667.1 catabolite control protein A Regulator
  EHW89_RS03230 (EHW89_03230) - 667953..668951 (+) 999 WP_126466668.1 glycosyltransferase family 4 protein -
  EHW89_RS03235 (EHW89_03235) - 668953..670266 (+) 1314 WP_126466669.1 glycosyltransferase family 4 protein -
  EHW89_RS03240 (EHW89_03240) - 670293..670634 (+) 342 WP_126466670.1 hypothetical protein -
  EHW89_RS03245 (EHW89_03245) micA 670926..671627 (+) 702 WP_003025150.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37058.11 Da        Isoelectric Point: 5.5350

>NTDB_id=331778 EHW89_RS03225 WP_126466667.1 666769..667773(+) (ccpA) [Streptococcus periodonticum strain KCOM 2412]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVDHQLPS
VNIDYKQATMDAVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKDVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=331778 EHW89_RS03225 WP_126466667.1 666769..667773(+) (ccpA) [Streptococcus periodonticum strain KCOM 2412]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTTTTGGAAGTGATTGACCGCTTGGATTACCGTCCAAATG
CAGTGGCGCGTGGTCTTGCTAGCAAAAAGACGACGACTGTTGGAGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTTAATACGCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTAACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGCACAGTTGATGTGGATCATCAATTACCAAGT
GTGAATATTGACTATAAGCAAGCGACCATGGATGCAGTTGAACGTCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGTTACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGGCTGTTGAATGGTTTATCTGATAAGGATGTAAATATACC
AGAAGATTTTGAAATCATCACTAGCGATGATTCGCAGGTAGCACGCTTTACTCGTCCAAATTTGACAACTATTGGTCAGC
CTTTGTATGACCTCGGTGCGATTAGTATGCGCATGTTGACTAAGATTATGCACAAGGAAGAGCTAGAAGAACGCGAAGTG
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGAAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9EXZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

89.82

100

0.898
  ccpA Streptococcus pneumoniae D39

87.725

100

0.877
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

99.102

0.572

Multiple sequence alignment