Detailed information NTG0033148

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SPJ_RS04600
• Genome accession: NC_012466
• Coordinates: 878144..879097 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495898.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae JJA
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 873144..884097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPJ_RS04575 (SPJ_0914)	rpmG	873887..874036 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
SPJ_RS04580 (SPJ_0915)	secG	874076..874309 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
SPJ_RS04585 (SPJ_0916)	rnr	874411..876765 (+)	2355	WP_000654890.1	ribonuclease R	-
SPJ_RS04590 (SPJ_0917)	smpB	876728..877195 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
SPJ_RS04595 (SPJ_0918)	tehB	877211..878071 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
SPJ_RS04600 (SPJ_0919)	coiA	878144..879097 (+)	954	WP_000495898.1	competence protein CoiA	Machinery gene
SPJ_RS04605 (SPJ_0920)	pepF	879116..880918 (+)	1803	WP_000244122.1	oligoendopeptidase F	Regulator
SPJ_RS04610 (SPJ_0921)	-	880920..881633 (+)	714	WP_000230399.1	O-methyltransferase	-
SPJ_RS04615 (SPJ_0922)	prsA	881700..882641 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
SPJ_RS04620 (SPJ_0923)	-	882758..883099 (-)	342	Protein_883	IS3 family transposase	-
SPJ_RS12765	-	883512..883607 (+)	96	Protein_884	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38233.91 Da
• Isoelectric Point: 9.3239

>NTDB_id=33148 SPJ_RS04600 WP_000495898.1 878144..879097(+) (coiA) [Streptococcus pneumoniae JJA]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLSRLQQGFLYFSQNMGF
YVWELDKKKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=33148 SPJ_RS04600 WP_000495898.1 878144..879097(+) (coiA) [Streptococcus pneumoniae JJA]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAGCACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGAGTCGTCTACAGCAAGGTTTTCTGTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGAAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATTCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	98.423	100	0.984
coiA	Streptococcus pneumoniae Rx1	98.107	100	0.981
coiA	Streptococcus pneumoniae D39	98.107	100	0.981
coiA	Streptococcus pneumoniae R6	98.107	100	0.981
coiA	Streptococcus mitis NCTC 12261	88.328	100	0.883
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432