Detailed information
Bioinformatically predicted
Overview
| Name | comEC | Type | Machinery gene |
| Locus tag | SCA_RS12945 | Genome accession | NC_012121 |
| Coordinates | 1221840..1222178 (-) | Length | 112 a.a. |
| NCBI ID | WP_015900456.1 | Uniprot ID | B9DNK7 |
| Organism | Staphylococcus carnosus subsp. carnosus TM300 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1216840..1227178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCA_RS06035 (SCA_1205) | hemW | 1217230..1218351 (-) | 1122 | WP_015900452.1 | radical SAM family heme chaperone HemW | - |
| SCA_RS06040 (SCA_1206) | lepA | 1218420..1220243 (-) | 1824 | WP_015900453.1 | translation elongation factor 4 | - |
| SCA_RS06045 (SCA_1207) | rpsT | 1220508..1220759 (+) | 252 | WP_015900454.1 | 30S ribosomal protein S20 | - |
| SCA_RS06050 (SCA_1208) | holA | 1220792..1221766 (-) | 975 | WP_015900455.1 | DNA polymerase III subunit delta | - |
| SCA_RS12945 (SCA_1209) | comEC | 1221840..1222178 (-) | 339 | WP_015900456.1 | ComEC/Rec2 family competence protein | Machinery gene |
| SCA_RS06055 (SCA_1210) | - | 1222193..1224076 (-) | 1884 | WP_015900457.1 | ComEC/Rec2 family competence protein | - |
| SCA_RS06060 (SCA_1211) | - | 1224084..1224545 (-) | 462 | WP_015900458.1 | ComE operon protein 2 | - |
| SCA_RS06065 (SCA_1212) | - | 1224620..1225288 (-) | 669 | WP_015900459.1 | ComEA family DNA-binding protein | - |
| SCA_RS06070 (SCA_1213) | - | 1225337..1226053 (-) | 717 | WP_015900460.1 | class I SAM-dependent DNA methyltransferase | - |
| SCA_RS06075 (SCA_1214) | rsfS | 1226056..1226406 (-) | 351 | WP_015900461.1 | ribosome silencing factor | - |
| SCA_RS06080 (SCA_1215) | yqeK | 1226407..1226991 (-) | 585 | WP_015900462.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12612.39 Da Isoelectric Point: 10.1713
>NTDB_id=33041 SCA_RS12945 WP_015900456.1 1221840..1222178(-) (comEC) [Staphylococcus carnosus subsp. carnosus TM300]
MAIIKTRKYNILTTGDATVKNESKLLANYLIPRIDILKVGHHGSKTSSSEKFINSIHPHYSVISSGKNNAYKLPNKEVIG
RLNKVNSQIYNTQKNGQITFNLDDEIQVLTEQ
MAIIKTRKYNILTTGDATVKNESKLLANYLIPRIDILKVGHHGSKTSSSEKFINSIHPHYSVISSGKNNAYKLPNKEVIG
RLNKVNSQIYNTQKNGQITFNLDDEIQVLTEQ
Nucleotide
Download Length: 339 bp
>NTDB_id=33041 SCA_RS12945 WP_015900456.1 1221840..1222178(-) (comEC) [Staphylococcus carnosus subsp. carnosus TM300]
ATGGCAATCATTAAAACACGTAAATATAATATACTAACCACTGGTGATGCAACTGTTAAAAATGAATCAAAATTATTAGC
TAATTACTTAATTCCTAGAATTGATATTTTGAAAGTAGGCCATCATGGCAGTAAAACAAGTTCTAGTGAAAAGTTTATAA
ATAGTATCCATCCTCATTATAGCGTTATTTCGAGTGGTAAAAACAACGCATATAAACTTCCAAATAAAGAAGTAATAGGC
CGTCTAAATAAAGTAAATTCTCAAATATATAATACTCAAAAAAATGGACAGATAACATTTAATCTAGATGATGAAATACA
AGTATTAACAGAACAATAA
ATGGCAATCATTAAAACACGTAAATATAATATACTAACCACTGGTGATGCAACTGTTAAAAATGAATCAAAATTATTAGC
TAATTACTTAATTCCTAGAATTGATATTTTGAAAGTAGGCCATCATGGCAGTAAAACAAGTTCTAGTGAAAAGTTTATAA
ATAGTATCCATCCTCATTATAGCGTTATTTCGAGTGGTAAAAACAACGCATATAAACTTCCAAATAAAGAAGTAATAGGC
CGTCTAAATAAAGTAAATTCTCAAATATATAATACTCAAAAAAATGGACAGATAACATTTAATCTAGATGATGAAATACA
AGTATTAACAGAACAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC | Staphylococcus aureus N315 |
61.224 |
87.5 |
0.536 |
| comEC | Staphylococcus aureus MW2 |
61.224 |
87.5 |
0.536 |
| comEC | Lactococcus lactis subsp. cremoris KW2 |
48.864 |
78.571 |
0.384 |
| rec2 | Haemophilus influenzae Rd KW20 |
42.157 |
91.071 |
0.384 |