Detailed information NTG0330103

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EI069_RS10560
• Genome accession: NZ_CP034242
• Coordinates: 2186436..2187137 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii isolate 09A16CRGN0014
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2181436..2192137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EI069_RS10530 (EI069_10530)	-	2181742..2182185 (-)	444	WP_001246675.1	SRPBCC family protein	-
EI069_RS10535 (EI069_10535)	tadA	2182255..2182758 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
EI069_RS10540 (EI069_10540)	-	2182765..2183889 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EI069_RS10545 (EI069_10545)	ung	2183886..2184599 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
EI069_RS10550 (EI069_10550)	-	2184650..2185246 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
EI069_RS10555 (EI069_10555)	gspK	2185477..2186436 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
EI069_RS10560 (EI069_10560)	xcpW	2186436..2187137 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EI069_RS10565 (EI069_10565)	xcpV	2187137..2187517 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EI069_RS10570 (EI069_10570)	-	2187507..2188061 (-)	555	WP_000841373.1	type II secretion system protein	-
EI069_RS10575 (EI069_10575)	-	2188071..2188679 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EI069_RS10580 (EI069_10580)	-	2188717..2189490 (-)	774	WP_000497298.1	TatD family hydrolase	-
EI069_RS10585 (EI069_10585)	-	2189508..2189849 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
EI069_RS10590 (EI069_10590)	-	2189861..2190841 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
EI069_RS10595 (EI069_10595)	kdsB	2190853..2191614 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=330103 EI069_RS10560 WP_000594589.1 2186436..2187137(-) (xcpW) [Acinetobacter baumannii isolate 09A16CRGN0014]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=330103 EI069_RS10560 WP_000594589.1 2186436..2187137(-) (xcpW) [Acinetobacter baumannii isolate 09A16CRGN0014]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996