Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DSB70_RS13635 | Genome accession | NZ_CP034213 |
| Coordinates | 2651822..2652358 (-) | Length | 178 a.a. |
| NCBI ID | WP_000168310.1 | Uniprot ID | A0A7U8WHF9 |
| Organism | Escherichia albertii strain NCTC 9362 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2646822..2657358
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB70_RS13615 | soxR | 2648357..2648821 (-) | 465 | WP_000412439.1 | redox-sensitive transcriptional activator SoxR | - |
| DSB70_RS13620 | soxS | 2648907..2649230 (+) | 324 | WP_000019352.1 | superoxide response transcriptional regulator SoxS | - |
| DSB70_RS13625 | - | 2649233..2650819 (-) | 1587 | WP_125060118.1 | EAL domain-containing protein | - |
| DSB70_RS13630 | - | 2651267..2651548 (+) | 282 | WP_010338933.1 | YjcB family protein | - |
| DSB70_RS13635 | ssb | 2651822..2652358 (-) | 537 | WP_000168310.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| DSB70_RS13640 | uvrA | 2652610..2655432 (+) | 2823 | WP_125060119.1 | excinuclease ABC subunit UvrA | - |
| DSB70_RS13645 | - | 2655638..2655994 (-) | 357 | WP_000155670.1 | MmcQ/YjbR family DNA-binding protein | - |
| DSB70_RS13650 | - | 2655998..2656414 (-) | 417 | WP_000270382.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| DSB70_RS13655 | aphA | 2656525..2657237 (-) | 713 | Protein_2665 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19005.02 Da Isoelectric Point: 5.2358
>NTDB_id=329864 DSB70_RS13635 WP_000168310.1 2651822..2652358(-) (ssb) [Escherichia albertii strain NCTC 9362]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQSGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
PAAPSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQSGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
PAAPSNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=329864 DSB70_RS13635 WP_000168310.1 2651822..2652358(-) (ssb) [Escherichia albertii strain NCTC 9362]
ATGGCCAGCAGAGGCGTAAACAAGGTTATTCTCGTTGGTAATCTGGGTCAGGACCCGGAAGTACGCTATATGCCAAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACTG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCAGCGAATATCTGCGCAAAGGTTCCCAGGTTTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCCAGGATCGCTACACGACAGAAGTTGTCGTAAACGTCGG
CGGCACTATGCAGATGTTGGGTGGGCGTCAGAGTGGTGGCGCTCCGGCTGGCGGCAATATCGGTGGCGGTCAGCCGCAGG
GTGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCCGCT
CCGGCAGCGCCGTCTAACGAACCGCCGATGGACTTTGATGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTTATTCTCGTTGGTAATCTGGGTCAGGACCCGGAAGTACGCTATATGCCAAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACTG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCAGCGAATATCTGCGCAAAGGTTCCCAGGTTTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCCAGGATCGCTACACGACAGAAGTTGTCGTAAACGTCGG
CGGCACTATGCAGATGTTGGGTGGGCGTCAGAGTGGTGGCGCTCCGGCTGGCGGCAATATCGGTGGCGGTCAGCCGCAGG
GTGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCCGCT
CCGGCAGCGCCGTCTAACGAACCGCCGATGGACTTTGATGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
74.444 |
100 |
0.753 |
| ssb | Glaesserella parasuis strain SC1401 |
58.47 |
100 |
0.601 |
| ssb | Neisseria meningitidis MC58 |
48.619 |
100 |
0.494 |
| ssb | Neisseria gonorrhoeae MS11 |
48.619 |
100 |
0.494 |