Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EHN06_RS19360 Genome accession   NZ_CP034142
Coordinates   4248822..4249214 (+) Length   130 a.a.
NCBI ID   WP_127334110.1    Uniprot ID   A0A3Q9NL95
Organism   Marinobacter sp. NP-4(2019)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4243822..4254214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHN06_RS19330 (EHN06_19330) - 4244056..4245138 (-) 1083 WP_228257359.1 aspartate carbamoyltransferase catalytic subunit -
  EHN06_RS19335 (EHN06_19335) pyrR 4245180..4245689 (-) 510 WP_127334106.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EHN06_RS19340 (EHN06_19340) ruvX 4245730..4246155 (-) 426 WP_127334107.1 Holliday junction resolvase RuvX -
  EHN06_RS19345 (EHN06_19345) - 4246148..4246714 (-) 567 WP_164735636.1 YqgE/AlgH family protein -
  EHN06_RS19350 (EHN06_19350) - 4246711..4247577 (-) 867 WP_127334108.1 energy transducer TonB -
  EHN06_RS19355 (EHN06_19355) gshB 4247580..4248527 (-) 948 WP_127334109.1 glutathione synthase -
  EHN06_RS19360 (EHN06_19360) pilG 4248822..4249214 (+) 393 WP_127334110.1 twitching motility response regulator PilG Regulator
  EHN06_RS19365 (EHN06_19365) pilH 4249247..4249609 (+) 363 WP_127334111.1 twitching motility response regulator PilH -
  EHN06_RS19370 (EHN06_19370) - 4249630..4250175 (+) 546 WP_127334112.1 chemotaxis protein CheW -
  EHN06_RS19375 (EHN06_19375) - 4250266..4252341 (+) 2076 WP_164735637.1 methyl-accepting chemotaxis protein -
  EHN06_RS19380 (EHN06_19380) - 4252369..4253268 (+) 900 WP_127334113.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14596.84 Da        Isoelectric Point: 4.9323

>NTDB_id=329338 EHN06_RS19360 WP_127334110.1 4248822..4249214(+) (pilG) [Marinobacter sp. NP-4(2019)]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSEPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=329338 EHN06_RS19360 WP_127334110.1 4248822..4249214(+) (pilG) [Marinobacter sp. NP-4(2019)]
ATGGATGACAACTTCGAGAATCTGAAGATTATGGTGATCGACGACAGCAAAACCATTCGTCGCACCGCAGAAACCCTTCT
GAAAAAAGTTGGCTGTGAGGTCATCACCGCAACCGACGGCTTTGACGCTCTGGCGAAAATCGCCGATTCCGAGCCGGACA
TCATTTTTGTCGACATCATGATGCCCCGCCTGGACGGTTATCAGACCTGCGCACTGATCAAGAACAATTCCTCTTTCAAA
AAGACGCCGGTCATCATGCTCTCCAGTAAGGACGGTCTGTTTGACAAGGCCAAGGGCCGCATTGTCGGTTCTGATCAGTA
TCTGACCAAGCCGTTCAGCAAGGACGAGCTGCTCAACACCATCCGCCAATACGTACCCCAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9NL95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362
  micA Streptococcus pneumoniae Cp1015

43.119

83.846

0.362

Multiple sequence alignment