Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EHN06_RS04135 | Genome accession | NZ_CP034142 |
| Coordinates | 907896..908426 (+) | Length | 176 a.a. |
| NCBI ID | WP_127330418.1 | Uniprot ID | A0A3Q9NH86 |
| Organism | Marinobacter sp. NP-4(2019) | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 902896..913426
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHN06_RS04120 (EHN06_04120) | bfr | 902962..903429 (+) | 468 | WP_127330412.1 | bacterioferritin | - |
| EHN06_RS04125 (EHN06_04125) | uvrA | 903460..906279 (-) | 2820 | WP_127330414.1 | excinuclease ABC subunit UvrA | - |
| EHN06_RS04130 (EHN06_04130) | - | 906467..907837 (+) | 1371 | WP_127330416.1 | MFS transporter | - |
| EHN06_RS04135 (EHN06_04135) | ssb | 907896..908426 (+) | 531 | WP_127330418.1 | single-stranded DNA-binding protein | Machinery gene |
| EHN06_RS04140 (EHN06_04140) | ntrC | 908526..909953 (-) | 1428 | WP_127330420.1 | nitrogen regulation protein NR(I) | - |
| EHN06_RS04145 (EHN06_04145) | glnL | 909950..911044 (-) | 1095 | WP_127334340.1 | nitrogen regulation protein NR(II) | - |
| EHN06_RS04150 (EHN06_04150) | - | 911303..911827 (-) | 525 | WP_127330422.1 | DUF4124 domain-containing protein | - |
| EHN06_RS04155 (EHN06_04155) | glnA | 912011..913414 (-) | 1404 | WP_127330424.1 | glutamate--ammonia ligase | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19287.33 Da Isoelectric Point: 4.9464
>NTDB_id=329318 EHN06_RS04135 WP_127330418.1 907896..908426(+) (ssb) [Marinobacter sp. NP-4(2019)]
MARGVNKVILIGNLGQDPETRYTPNGNAVVNLNLATDESYKDRQTGQMVPKTEWHRIVMFGKIAEVAGQYLRKGSKVYIE
GKLQTRKWQGQDGQDRYTTEVVVDINGQMQMLDSRGGEGGMSQGAPAGRPQQQPSGYNAPPANQGNQPQQQSGGYSQPSQ
GSMPEPVDDFDDDIPF
MARGVNKVILIGNLGQDPETRYTPNGNAVVNLNLATDESYKDRQTGQMVPKTEWHRIVMFGKIAEVAGQYLRKGSKVYIE
GKLQTRKWQGQDGQDRYTTEVVVDINGQMQMLDSRGGEGGMSQGAPAGRPQQQPSGYNAPPANQGNQPQQQSGGYSQPSQ
GSMPEPVDDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=329318 EHN06_RS04135 WP_127330418.1 907896..908426(+) (ssb) [Marinobacter sp. NP-4(2019)]
ATGGCACGAGGCGTAAACAAGGTCATTCTTATCGGCAATCTGGGGCAGGACCCGGAAACCCGTTATACCCCCAATGGCAA
TGCAGTGGTAAACCTGAACCTTGCCACGGATGAAAGTTACAAGGACAGGCAAACTGGTCAGATGGTGCCGAAAACCGAAT
GGCACCGCATTGTGATGTTCGGCAAGATTGCCGAAGTGGCCGGCCAGTACCTGCGTAAGGGCTCCAAGGTCTATATCGAA
GGCAAGTTGCAAACCCGTAAATGGCAGGGACAGGACGGTCAGGATCGTTACACCACGGAAGTGGTGGTGGATATCAATGG
CCAGATGCAGATGCTCGATAGCCGCGGTGGTGAAGGTGGCATGAGTCAGGGCGCGCCCGCAGGCCGGCCCCAGCAACAGC
CGTCCGGTTACAATGCACCGCCCGCCAATCAGGGTAACCAGCCGCAACAACAGTCTGGCGGCTATAGTCAGCCTTCCCAG
GGCAGCATGCCCGAACCAGTGGACGATTTTGACGACGATATTCCGTTCTGA
ATGGCACGAGGCGTAAACAAGGTCATTCTTATCGGCAATCTGGGGCAGGACCCGGAAACCCGTTATACCCCCAATGGCAA
TGCAGTGGTAAACCTGAACCTTGCCACGGATGAAAGTTACAAGGACAGGCAAACTGGTCAGATGGTGCCGAAAACCGAAT
GGCACCGCATTGTGATGTTCGGCAAGATTGCCGAAGTGGCCGGCCAGTACCTGCGTAAGGGCTCCAAGGTCTATATCGAA
GGCAAGTTGCAAACCCGTAAATGGCAGGGACAGGACGGTCAGGATCGTTACACCACGGAAGTGGTGGTGGATATCAATGG
CCAGATGCAGATGCTCGATAGCCGCGGTGGTGAAGGTGGCATGAGTCAGGGCGCGCCCGCAGGCCGGCCCCAGCAACAGC
CGTCCGGTTACAATGCACCGCCCGCCAATCAGGGTAACCAGCCGCAACAACAGTCTGGCGGCTATAGTCAGCCTTCCCAG
GGCAGCATGCCCGAACCAGTGGACGATTTTGACGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
60.894 |
100 |
0.619 |
| ssb | Glaesserella parasuis strain SC1401 |
51.795 |
100 |
0.574 |
| ssb | Neisseria meningitidis MC58 |
46.927 |
100 |
0.477 |
| ssb | Neisseria gonorrhoeae MS11 |
46.927 |
100 |
0.477 |