Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | EIA51_RS09130 | Genome accession | NZ_CP034110 |
| Coordinates | 1932780..1933136 (+) | Length | 118 a.a. |
| NCBI ID | WP_035685388.1 | Uniprot ID | - |
| Organism | Avibacterium paragallinarum strain FARPER-174 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1927780..1938136
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EIA51_RS09115 (EIA51_09115) | - | 1928646..1929914 (-) | 1269 | WP_035685622.1 | AmpG family muropeptide MFS transporter | - |
| EIA51_RS09120 (EIA51_09120) | galE | 1929981..1930997 (-) | 1017 | WP_035685386.1 | UDP-glucose 4-epimerase GalE | - |
| EIA51_RS09125 (EIA51_09125) | - | 1931204..1932517 (+) | 1314 | WP_017805051.1 | NCS2 family permease | - |
| EIA51_RS09130 (EIA51_09130) | comE1/comEA | 1932780..1933136 (+) | 357 | WP_035685388.1 | ComEA family DNA-binding protein | Machinery gene |
| EIA51_RS09135 (EIA51_09135) | rdgB | 1933274..1933870 (+) | 597 | WP_035685390.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| EIA51_RS09140 (EIA51_09140) | hemW | 1933870..1935024 (+) | 1155 | WP_035685394.1 | radical SAM family heme chaperone HemW | - |
| EIA51_RS09145 (EIA51_09145) | luxS | 1935092..1935598 (-) | 507 | WP_035685396.1 | S-ribosylhomocysteine lyase | - |
| EIA51_RS09150 (EIA51_09150) | - | 1935821..1936279 (-) | 459 | WP_035685398.1 | YqaA family protein | - |
| EIA51_RS09155 (EIA51_09155) | - | 1936272..1936880 (-) | 609 | WP_035685399.1 | sugar O-acetyltransferase | - |
| EIA51_RS09160 (EIA51_09160) | - | 1936881..1937483 (-) | 603 | WP_035685401.1 | beta-phosphoglucomutase family hydrolase | - |
| EIA51_RS09165 (EIA51_09165) | - | 1937626..1938003 (+) | 378 | WP_017805060.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12796.70 Da Isoelectric Point: 8.4831
>NTDB_id=329094 EIA51_RS09130 WP_035685388.1 1932780..1933136(+) (comE1/comEA) [Avibacterium paragallinarum strain FARPER-174]
MKIKTILSSLILAITFIGSVYADETVNPPATTQVTDNKTIATTFIGEKLNINTASASEIQKALVGIGAKKAEAIVEYREQ
HGKFIAPEQLLEVKGIGKAIFEKNKDRIDLSSFNSNSQ
MKIKTILSSLILAITFIGSVYADETVNPPATTQVTDNKTIATTFIGEKLNINTASASEIQKALVGIGAKKAEAIVEYREQ
HGKFIAPEQLLEVKGIGKAIFEKNKDRIDLSSFNSNSQ
Nucleotide
Download Length: 357 bp
>NTDB_id=329094 EIA51_RS09130 WP_035685388.1 1932780..1933136(+) (comE1/comEA) [Avibacterium paragallinarum strain FARPER-174]
ATGAAAATTAAGACGATTTTATCTTCTCTCATTTTGGCAATAACATTTATTGGTTCGGTTTATGCTGATGAAACAGTGAA
TCCACCAGCCACGACACAAGTGACGGATAATAAAACTATCGCCACCACATTTATTGGCGAAAAGCTCAATATTAATACGG
CAAGTGCAAGTGAAATTCAAAAAGCCTTAGTAGGCATTGGGGCGAAGAAAGCAGAAGCTATCGTGGAATATCGAGAACAA
CACGGTAAATTTATCGCACCAGAACAACTATTAGAAGTAAAGGGAATTGGAAAAGCGATTTTTGAAAAAAATAAAGATCG
CATAGATTTATCTTCATTTAATAGTAATAGCCAATAG
ATGAAAATTAAGACGATTTTATCTTCTCTCATTTTGGCAATAACATTTATTGGTTCGGTTTATGCTGATGAAACAGTGAA
TCCACCAGCCACGACACAAGTGACGGATAATAAAACTATCGCCACCACATTTATTGGCGAAAAGCTCAATATTAATACGG
CAAGTGCAAGTGAAATTCAAAAAGCCTTAGTAGGCATTGGGGCGAAGAAAGCAGAAGCTATCGTGGAATATCGAGAACAA
CACGGTAAATTTATCGCACCAGAACAACTATTAGAAGTAAAGGGAATTGGAAAAGCGATTTTTGAAAAAAATAAAGATCG
CATAGATTTATCTTCATTTAATAGTAATAGCCAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
53.571 |
94.915 |
0.508 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
50 |
89.831 |
0.449 |
| comEA | Vibrio cholerae C6706 |
41.441 |
94.068 |
0.39 |
| comEA | Vibrio cholerae strain A1552 |
41.441 |
94.068 |
0.39 |