Detailed information NTG0328890

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: EHF38_RS14060
• Genome accession: NZ_CP034092
• Coordinates: 2917245..2918363 (+)
• Length: 372 a.a.
• NCBI ID: WP_104159726.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A52
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2912245..2923363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHF38_RS14050 (EHF38_14050)	-	2915361..2916053 (-)	693	WP_001108509.1	YggS family pyridoxal phosphate-dependent enzyme	-
EHF38_RS14055 (EHF38_14055)	pilT	2916180..2917217 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
EHF38_RS14060 (EHF38_14060)	pilU	2917245..2918363 (+)	1119	WP_104159726.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
EHF38_RS14065 (EHF38_14065)	fur	2918433..2918870 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
EHF38_RS14070 (EHF38_14070)	bamE	2918982..2919380 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
EHF38_RS14075 (EHF38_14075)	-	2919435..2919758 (-)	324	WP_000442590.1	RnfH family protein	-
EHF38_RS14080 (EHF38_14080)	-	2919758..2920825 (-)	1068	WP_004748097.1	hypothetical protein	-
EHF38_RS14090 (EHF38_14090)	-	2920978..2921433 (-)	456	WP_000782976.1	bacteriohemerythrin	-
EHF38_RS14095 (EHF38_14095)	-	2921686..2922534 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41903.14 Da
• Isoelectric Point: 6.6943

>NTDB_id=328890 EHF38_RS14060 WP_104159726.1 2917245..2918363(+) (pilU) [Acinetobacter baumannii strain A52]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLIIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=328890 EHF38_RS14060 WP_104159726.1 2917245..2918363(+) (pilU) [Acinetobacter baumannii strain A52]
ATGGATTTTAATGACCTACTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGCCTTTCTGGGGAAGTAATTGGTCAACTGTTACATTCCA
TTATGAGTGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGTGGCATTATTATTTTCGTAGGTGCGACAG
GTACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGATCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAATCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.022	98.925	0.683
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.292	95.699	0.395