Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | EFD76_RS08170 | Genome accession | NZ_CP033987 |
| Coordinates | 1659509..1659808 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain P2D1C1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1654509..1664808
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD76_RS08145 (EFD76_08520) | gcvPA | 1655721..1657067 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| EFD76_RS08150 (EFD76_08525) | gcvT | 1657087..1658178 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EFD76_RS08155 (EFD76_08530) | - | 1658337..1658861 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| EFD76_RS08160 (EFD76_08535) | - | 1658851..1658997 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| EFD76_RS08165 (EFD76_08540) | comGF | 1659094..1659591 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EFD76_RS08170 (EFD76_08545) | comGE | 1659509..1659808 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| EFD76_RS08175 (EFD76_08550) | comGD | 1659795..1660241 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EFD76_RS08180 (EFD76_08555) | comGC | 1660219..1660530 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EFD76_RS08185 (EFD76_08560) | comGB | 1660544..1661614 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EFD76_RS08190 (EFD76_08565) | comGA | 1661586..1662560 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EFD76_RS08195 (EFD76_08570) | - | 1662612..1663235 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| EFD76_RS08200 (EFD76_08575) | - | 1663232..1663561 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| EFD76_RS08205 (EFD76_08580) | - | 1663561..1664547 (-) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| EFD76_RS08210 (EFD76_08585) | - | 1664544..1664747 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=327634 EFD76_RS08170 WP_000844410.1 1659509..1659808(-) (comGE) [Staphylococcus aureus strain P2D1C1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=327634 EFD76_RS08170 WP_000844410.1 1659509..1659808(-) (comGE) [Staphylococcus aureus strain P2D1C1]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |