Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EHF39_RS08160 | Genome accession | NZ_CP033908 |
| Coordinates | 1567681..1568172 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain RLGH | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1562681..1573172
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHF39_RS08145 (EHF39_08145) | - | 1565415..1566359 (+) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
| EHF39_RS08150 (EHF39_08150) | - | 1566491..1567147 (+) | 657 | WP_011528940.1 | DUF1129 domain-containing protein | - |
| EHF39_RS08155 (EHF39_08155) | rpsR | 1567278..1567517 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| EHF39_RS08160 (EHF39_08160) | ssb | 1567681..1568172 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| EHF39_RS08165 (EHF39_08165) | rpsF | 1568194..1568484 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| EHF39_RS08170 (EHF39_08170) | - | 1568657..1568950 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| EHF39_RS08175 (EHF39_08175) | mutY | 1569118..1570272 (+) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| EHF39_RS08180 (EHF39_08180) | - | 1570449..1571036 (+) | 588 | WP_011528942.1 | helix-turn-helix transcriptional regulator | - |
| EHF39_RS08185 (EHF39_08185) | trxA | 1571088..1571420 (-) | 333 | WP_257577416.1 | thioredoxin | - |
| EHF39_RS08190 (EHF39_08190) | - | 1571483..1571983 (-) | 501 | WP_021299043.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=326987 EHF39_RS08160 WP_002983122.1 1567681..1568172(-) (ssb) [Streptococcus pyogenes strain RLGH]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=326987 EHF39_RS08160 WP_002983122.1 1567681..1568172(-) (ssb) [Streptococcus pyogenes strain RLGH]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAGGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAGGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |