Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FNL98_RS05320 | Genome accession | NZ_CP041585 |
| Coordinates | 901235..901759 (+) | Length | 174 a.a. |
| NCBI ID | WP_003688219.1 | Uniprot ID | B4RKU5 |
| Organism | Neisseria gonorrhoeae strain NJ1711654 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 896235..906759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNL98_RS05280 (FNL98_05280) | - | 896777..897451 (+) | 675 | WP_048589525.1 | opacity family porin | - |
| FNL98_RS05295 (FNL98_05295) | - | 897819..898309 (+) | 491 | Protein_896 | REP-associated tyrosine transposase | - |
| FNL98_RS05300 (FNL98_05300) | - | 898346..898612 (+) | 267 | Protein_897 | transposase | - |
| FNL98_RS05310 (FNL98_05310) | - | 899114..899737 (+) | 624 | WP_003688215.1 | lytic transglycosylase domain-containing protein | - |
| FNL98_RS05315 (FNL98_05315) | - | 899849..901231 (+) | 1383 | WP_003698298.1 | MFS transporter | - |
| FNL98_RS05320 (FNL98_05320) | ssb | 901235..901759 (+) | 525 | WP_003688219.1 | single-stranded DNA-binding protein | Machinery gene |
| FNL98_RS05325 (FNL98_05325) | - | 902132..903055 (+) | 924 | WP_003695068.1 | DMT family transporter | - |
| FNL98_RS05330 (FNL98_05330) | fumC | 903120..904508 (-) | 1389 | WP_003691001.1 | class II fumarate hydratase | - |
| FNL98_RS05335 (FNL98_05335) | recP/tkt | 904652..906631 (-) | 1980 | WP_003688227.1 | transketolase | Machinery gene |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19475.68 Da Isoelectric Point: 5.8313
>NTDB_id=326947 FNL98_RS05320 WP_003688219.1 901235..901759(+) (ssb) [Neisseria gonorrhoeae strain NJ1711654]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQNQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQNQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=326947 FNL98_RS05320 WP_003688219.1 901235..901759(+) (ssb) [Neisseria gonorrhoeae strain NJ1711654]
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAATCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAATCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
99.425 |
100 |
0.994 |
| ssb | Neisseria meningitidis MC58 |
98.276 |
100 |
0.983 |
| ssb | Vibrio cholerae strain A1552 |
47.486 |
100 |
0.489 |
| ssb | Glaesserella parasuis strain SC1401 |
43.889 |
100 |
0.454 |