Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EHF40_RS08160 | Genome accession | NZ_CP033907 |
| Coordinates | 1567688..1568179 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain Duke-Large | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1562688..1573179
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHF40_RS08145 (EHF40_08145) | - | 1565422..1566366 (+) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
| EHF40_RS08150 (EHF40_08150) | - | 1566498..1567154 (+) | 657 | WP_011528940.1 | DUF1129 domain-containing protein | - |
| EHF40_RS08155 (EHF40_08155) | rpsR | 1567285..1567524 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| EHF40_RS08160 (EHF40_08160) | ssb | 1567688..1568179 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| EHF40_RS08165 (EHF40_08165) | rpsF | 1568201..1568491 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| EHF40_RS08170 (EHF40_08170) | - | 1568664..1568957 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| EHF40_RS08175 (EHF40_08175) | mutY | 1569125..1570279 (+) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| EHF40_RS08180 (EHF40_08180) | - | 1570456..1571043 (+) | 588 | WP_011528942.1 | helix-turn-helix transcriptional regulator | - |
| EHF40_RS08185 (EHF40_08185) | trxA | 1571095..1571427 (-) | 333 | WP_257577416.1 | thioredoxin | - |
| EHF40_RS08190 (EHF40_08190) | - | 1571490..1571990 (-) | 501 | WP_021299043.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=326932 EHF40_RS08160 WP_002983122.1 1567688..1568179(-) (ssb) [Streptococcus pyogenes strain Duke-Large]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=326932 EHF40_RS08160 WP_002983122.1 1567688..1568179(-) (ssb) [Streptococcus pyogenes strain Duke-Large]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAGGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAGGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |