Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   EG363_RS03615 Genome accession   NZ_CP033865
Coordinates   703591..704463 (+) Length   290 a.a.
NCBI ID   WP_000620184.1    Uniprot ID   A0A0E1X7W8
Organism   Staphylococcus aureus strain FDAARGOS_504     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 698591..709463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG363_RS03590 (EG363_03595) sucC 698707..699873 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  EG363_RS03595 (EG363_03600) sucD 699895..700803 (+) 909 WP_000110252.1 succinate--CoA ligase subunit alpha -
  EG363_RS03600 (EG363_03605) - 701030..702148 (+) 1119 WP_001041659.1 LysM peptidoglycan-binding domain-containing protein -
  EG363_RS15045 fmhC 702176..703419 (+) 1244 Protein_689 FemA/FemB family glycyltransferase FmhC -
  EG363_RS03615 (EG363_03620) dprA 703591..704463 (+) 873 WP_000620184.1 DNA-processing protein DprA Machinery gene
  EG363_RS03620 (EG363_03625) topA 704637..706712 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  EG363_RS03625 (EG363_03630) trmFO 706868..708175 (+) 1308 WP_000195249.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33547.97 Da        Isoelectric Point: 9.5241

>NTDB_id=326548 EG363_RS03615 WP_000620184.1 703591..704463(+) (dprA) [Staphylococcus aureus strain FDAARGOS_504]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEIGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=326548 EG363_RS03615 WP_000620184.1 703591..704463(+) (dprA) [Staphylococcus aureus strain FDAARGOS_504]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATACCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAGAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGCACATTAGC
ATTAAGAAATAAAATAGAAGAAATAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979

Multiple sequence alignment