Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EGY22_RS03780 | Genome accession | NZ_CP033861 |
| Coordinates | 827087..827599 (-) | Length | 170 a.a. |
| NCBI ID | WP_009461968.1 | Uniprot ID | U7U669 |
| Organism | Alcaligenes faecalis strain FDAARGOS_491 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 822087..832599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGY22_RS03750 (EGY22_03735) | - | 822134..822667 (+) | 534 | WP_080723763.1 | Chromate resistance protein ChrB | - |
| EGY22_RS03755 (EGY22_03740) | - | 822621..823877 (+) | 1257 | WP_372407706.1 | MFS transporter | - |
| EGY22_RS03760 (EGY22_03745) | - | 823918..824304 (-) | 387 | WP_009461960.1 | RidA family protein | - |
| EGY22_RS03765 (EGY22_03750) | - | 824362..825336 (-) | 975 | WP_042485367.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| EGY22_RS03770 (EGY22_03755) | - | 825348..826265 (-) | 918 | WP_042485364.1 | fumarylacetoacetate hydrolase family protein | - |
| EGY22_RS03775 (EGY22_03760) | - | 826280..826939 (-) | 660 | WP_042485360.1 | GntR family transcriptional regulator | - |
| EGY22_RS03780 (EGY22_03765) | ssb | 827087..827599 (-) | 513 | WP_009461968.1 | single-stranded DNA-binding protein | Machinery gene |
| EGY22_RS03785 (EGY22_03770) | - | 827860..829071 (-) | 1212 | WP_096917404.1 | MFS transporter | - |
| EGY22_RS03790 (EGY22_03775) | uvrA | 829183..832146 (+) | 2964 | WP_042485355.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18759.79 Da Isoelectric Point: 5.3412
>NTDB_id=326485 EGY22_RS03780 WP_009461968.1 827087..827599(-) (ssb) [Alcaligenes faecalis strain FDAARGOS_491]
MASVNKVILVGNLGRDPEVRYSAEGSAICNISIATTSQWKDRTSGERREETEWHRVVFYNRLAEIAGEYLRKGRPVYVEG
RLRTRKWTGQDGQERFTTEIIAEQMQMLGGRDGGDMGGGSMGGGEYGGGGAPAPQRAQRPAPQQQQQQQAPRNNAPMSDN
LADMDDDIPF
MASVNKVILVGNLGRDPEVRYSAEGSAICNISIATTSQWKDRTSGERREETEWHRVVFYNRLAEIAGEYLRKGRPVYVEG
RLRTRKWTGQDGQERFTTEIIAEQMQMLGGRDGGDMGGGSMGGGEYGGGGAPAPQRAQRPAPQQQQQQQAPRNNAPMSDN
LADMDDDIPF
Nucleotide
Download Length: 513 bp
>NTDB_id=326485 EGY22_RS03780 WP_009461968.1 827087..827599(-) (ssb) [Alcaligenes faecalis strain FDAARGOS_491]
ATGGCATCGGTAAATAAAGTCATTCTGGTGGGCAATCTTGGCCGCGACCCAGAAGTACGCTACAGCGCAGAAGGATCGGC
CATCTGCAATATTTCCATTGCCACGACTTCGCAGTGGAAAGACCGTACCTCCGGCGAGCGCCGTGAGGAAACCGAATGGC
ACCGTGTGGTGTTCTACAACCGTCTGGCTGAAATCGCGGGTGAGTACCTGCGCAAAGGCCGTCCCGTTTACGTAGAAGGT
CGCCTGCGCACCCGTAAATGGACAGGTCAGGATGGTCAGGAGCGTTTCACGACCGAGATCATCGCCGAGCAAATGCAAAT
GCTGGGTGGCCGTGACGGTGGTGATATGGGCGGCGGCAGCATGGGTGGTGGCGAATACGGTGGCGGTGGTGCACCAGCTC
CGCAACGTGCTCAGCGCCCAGCGCCTCAGCAACAGCAGCAACAACAGGCCCCACGTAATAACGCTCCTATGTCGGACAAT
CTGGCCGATATGGATGACGATATTCCGTTCTGA
ATGGCATCGGTAAATAAAGTCATTCTGGTGGGCAATCTTGGCCGCGACCCAGAAGTACGCTACAGCGCAGAAGGATCGGC
CATCTGCAATATTTCCATTGCCACGACTTCGCAGTGGAAAGACCGTACCTCCGGCGAGCGCCGTGAGGAAACCGAATGGC
ACCGTGTGGTGTTCTACAACCGTCTGGCTGAAATCGCGGGTGAGTACCTGCGCAAAGGCCGTCCCGTTTACGTAGAAGGT
CGCCTGCGCACCCGTAAATGGACAGGTCAGGATGGTCAGGAGCGTTTCACGACCGAGATCATCGCCGAGCAAATGCAAAT
GCTGGGTGGCCGTGACGGTGGTGATATGGGCGGCGGCAGCATGGGTGGTGGCGAATACGGTGGCGGTGGTGCACCAGCTC
CGCAACGTGCTCAGCGCCCAGCGCCTCAGCAACAGCAGCAACAACAGGCCCCACGTAATAACGCTCCTATGTCGGACAAT
CTGGCCGATATGGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
52.717 |
100 |
0.571 |
| ssb | Glaesserella parasuis strain SC1401 |
46.632 |
100 |
0.529 |
| ssb | Neisseria gonorrhoeae MS11 |
47.778 |
100 |
0.506 |
| ssb | Neisseria meningitidis MC58 |
47.778 |
100 |
0.506 |