Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EGX82_RS08125 | Genome accession | NZ_CP033822 |
| Coordinates | 1541023..1541514 (+) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae strain FDAARGOS_512 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1536023..1546514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX82_RS08100 (EGX82_08100) | - | 1536796..1537296 (+) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
| EGX82_RS08105 (EGX82_08105) | trxA | 1537377..1537691 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| EGX82_RS08110 (EGX82_08110) | - | 1537737..1538330 (-) | 594 | WP_000402395.1 | helix-turn-helix transcriptional regulator | - |
| EGX82_RS08115 (EGX82_08115) | mutY | 1538507..1539661 (-) | 1155 | WP_161512068.1 | A/G-specific adenine glycosylase | - |
| EGX82_RS08120 (EGX82_08120) | rpsF | 1540724..1541011 (+) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| EGX82_RS08125 (EGX82_08125) | ssbA | 1541023..1541514 (+) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| EGX82_RS08130 (EGX82_08130) | rpsR | 1541559..1541798 (+) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| EGX82_RS08135 (EGX82_08135) | - | 1541968..1542912 (+) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| EGX82_RS08140 (EGX82_08140) | - | 1542937..1543608 (+) | 672 | WP_000174846.1 | DUF1129 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=326137 EGX82_RS08125 WP_000609585.1 1541023..1541514(+) (ssbA) [Streptococcus agalactiae strain FDAARGOS_512]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=326137 EGX82_RS08125 WP_000609585.1 1541023..1541514(+) (ssbA) [Streptococcus agalactiae strain FDAARGOS_512]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAATGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAATGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |