Detailed information    

insolico Bioinformatically predicted

Overview

Name   cqsA   Type   Regulator
Locus tag   LPA_RS14190 Genome accession   NC_014125
Coordinates   3193146..3194396 (+) Length   416 a.a.
NCBI ID   WP_011947634.1    Uniprot ID   -
Organism   Legionella pneumophila 2300/99 Alcoy     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3188146..3199396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPA_RS14155 (lpa_03973) - 3188528..3188932 (+) 405 WP_011947629.1 DUF3775 domain-containing protein -
  LPA_RS14160 (lpa_03974) - 3189007..3189351 (-) 345 WP_011947630.1 hypothetical protein -
  LPA_RS14165 (lpa_03975) - 3189468..3190097 (+) 630 WP_010948424.1 trimeric intracellular cation channel family protein -
  LPA_RS14170 (lpa_03979) - 3190307..3190801 (-) 495 WP_010948425.1 peptidylprolyl isomerase -
  LPA_RS14175 (lpa_03980) tgt 3190828..3191979 (-) 1152 WP_011947631.1 tRNA guanosine(34) transglycosylase Tgt -
  LPA_RS14180 (lpa_03982) - 3192041..3192532 (-) 492 WP_011947632.1 disulfide bond formation protein B -
  LPA_RS14185 (lpa_03984) - 3192529..3192957 (-) 429 WP_011947633.1 cytochrome c5 family protein -
  LPA_RS14190 (lpa_03985) cqsA 3193146..3194396 (+) 1251 WP_011947634.1 quorum-sensing autoinducer LAI-1 synthase LqsA Regulator
  LPA_RS14195 (lpa_03987) - 3194478..3195503 (-) 1026 WP_011947635.1 response regulator -
  LPA_RS14200 (lpa_03988) - 3195785..3196348 (+) 564 WP_011947637.1 HdeD family acid-resistance protein -
  LPA_RS14205 (lpa_03989) lqsT 3196436..3196783 (-) 348 WP_011947638.1 ATP-binding protein Regulator
  LPA_RS14210 (lpa_03990) - 3196910..3197731 (+) 822 WP_228370635.1 IS982 family transposase -
  LPA_RS14215 (lpa_03991) - 3197747..3198751 (-) 1005 WP_011947639.1 hypothetical protein -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 46051.55 Da        Isoelectric Point: 8.9834

>NTDB_id=32613 LPA_RS14190 WP_011947634.1 3193146..3194396(+) (cqsA) [Legionella pneumophila 2300/99 Alcoy]
MSNTEYQTIDNETQYINGKEKHQNHAYPEYINHSMEKYYEGRVNKSWQGKHILKGKTPTANSLIFSSNDYLNISQHPQLI
KAQIAAMQKYGNGQMQSAVFLNNSSFLLSQCENKFSSFLNYSAALLTQSGWSANVGLIQTLAKYNTPVYLDFYAHMSFWS
GVKAARAKPIPFLHNSVDSLKKRIEHHGPGIIAVDSIYSTLGTISPLTAYADIARKFKCLLIVDESHSLGTHGSQGKGMV
AKLGLSSQIDIITASLAKALSGRGGIITGDRQLIEYIRYSSLPSIFSSALMPHDLAGFSASLEIITQEEWRRAKLQTNAD
FLREALSCEGINIGSSGSQIVPLVTGSEANTLWLRDELEKEDLFGAVFCSPATPKNKCLIRLSISAHHEKSDLLRVIECL
AKLARKRPDIPLFKGN

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=32613 LPA_RS14190 WP_011947634.1 3193146..3194396(+) (cqsA) [Legionella pneumophila 2300/99 Alcoy]
ATGAGCAATACAGAATACCAAACAATTGATAACGAGACTCAATATATCAATGGAAAAGAAAAACATCAAAACCATGCTTA
TCCTGAGTACATCAATCATTCCATGGAAAAATATTACGAGGGACGAGTCAATAAATCCTGGCAAGGGAAACACATACTTA
AAGGCAAAACCCCGACTGCAAATTCACTGATTTTTTCGAGCAATGATTATTTAAACATCAGTCAACATCCGCAATTAATT
AAAGCGCAAATTGCTGCGATGCAAAAATATGGTAATGGTCAAATGCAATCTGCTGTATTTTTAAATAACAGCTCTTTTTT
GCTCAGCCAATGTGAAAATAAATTCAGTTCCTTTTTAAATTATTCTGCGGCCCTGCTCACTCAATCAGGCTGGAGCGCTA
ACGTTGGTCTCATACAAACCCTGGCCAAGTACAATACACCAGTGTATCTGGATTTTTATGCCCATATGTCTTTTTGGTCT
GGTGTAAAAGCAGCAAGAGCCAAACCTATACCGTTTCTACATAATTCAGTCGATTCACTAAAAAAACGAATTGAACACCA
TGGACCAGGAATAATTGCAGTAGATTCTATTTATAGTACGCTGGGTACGATTAGTCCATTGACTGCCTATGCTGACATTG
CAAGAAAATTCAAATGTTTACTCATCGTCGATGAATCTCATTCATTAGGTACGCATGGCTCGCAAGGCAAGGGAATGGTG
GCTAAACTGGGATTATCAAGCCAAATAGACATCATAACAGCAAGCCTGGCTAAAGCCTTATCAGGACGTGGAGGCATCAT
TACAGGGGATAGGCAACTTATAGAATATATCAGATATTCATCTCTGCCTTCTATTTTTAGTTCTGCTTTAATGCCTCATG
ATTTAGCAGGATTTAGCGCATCATTAGAAATTATTACTCAAGAAGAATGGAGAAGAGCAAAATTACAAACCAATGCTGAT
TTTTTACGAGAAGCCTTATCATGCGAAGGAATTAATATAGGAAGTAGTGGCTCTCAAATAGTCCCTTTAGTTACAGGCAG
CGAGGCTAACACGCTTTGGTTAAGGGATGAGTTAGAAAAAGAAGACCTCTTTGGAGCCGTGTTCTGTTCACCCGCCACTC
CCAAAAATAAATGCCTGATTCGTTTATCCATCAGTGCGCATCACGAAAAATCGGACTTGCTCAGAGTGATTGAGTGCTTG
GCCAAACTTGCAAGAAAAAGACCCGATATTCCTTTGTTTAAGGGTAATTAA

Domains

Predicted by InterProScan.

Aminotransferase class I and II (Aminotran_1_2)

(63-398)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cqsA Vibrio cholerae strain A1552

44.892

89.423

0.401

Multiple sequence alignment