Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   EGX70_RS03445 Genome accession   NZ_CP033808
Coordinates   700941..701888 (-) Length   315 a.a.
NCBI ID   WP_000903642.1    Uniprot ID   A0AAV3JK20
Organism   Streptococcus sp. FDAARGOS_522     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 695941..706888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX70_RS03425 (EGX70_03425) prsA 696528..697457 (-) 930 WP_000857822.1 peptidylprolyl isomerase PrsA -
  EGX70_RS03430 (EGX70_03430) - 697518..698225 (-) 708 WP_000250853.1 O-methyltransferase -
  EGX70_RS03435 (EGX70_03435) - 698299..698925 (-) 627 WP_000736935.1 HAD hydrolase-like protein -
  EGX70_RS03440 (EGX70_03440) pepF 699120..700925 (-) 1806 WP_001282902.1 oligoendopeptidase F Regulator
  EGX70_RS03445 (EGX70_03445) coiA 700941..701888 (-) 948 WP_000903642.1 competence protein CoiA Machinery gene
  EGX70_RS03450 (EGX70_03450) - 701940..703091 (-) 1152 WP_123947919.1 MFS transporter -
  EGX70_RS03460 (EGX70_03460) - 703164..703883 (-) 720 WP_001234956.1 16S rRNA pseudouridine(516) synthase -
  EGX70_RS03465 (EGX70_03465) - 703979..704935 (+) 957 WP_000523788.1 glutathione S-transferase family protein -
  EGX70_RS03470 (EGX70_03470) - 705007..705708 (-) 702 WP_001263956.1 glucosamine-6-phosphate deaminase -
  EGX70_RS03475 (EGX70_03475) - 705859..706539 (-) 681 WP_000656582.1 VIT family protein -

Sequence


Protein


Download         Length: 315 a.a.        Molecular weight: 37807.57 Da        Isoelectric Point: 9.5842

>NTDB_id=325815 EGX70_RS03445 WP_000903642.1 700941..701888(-) (coiA) [Streptococcus sp. FDAARGOS_522]
MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENESNEHLQLKAKLYMSLSRENE
TMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERTKAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGF
HIWELDLRLEVLRLKYLIYEDLRGHVYYLSKTCPLSGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWLR
KQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLDQTLYPPVFYDKIVTKN

Nucleotide


Download         Length: 948 bp        

>NTDB_id=325815 EGX70_RS03445 WP_000903642.1 700941..701888(-) (coiA) [Streptococcus sp. FDAARGOS_522]
ATGTTAATTGCTAAAGACAAACAAGGAAATTTAATTAATCTACTCGAGTCTCATCCGGGAAAGGGACAGTATTTTTGTCC
AACTTGTTGTTCAGCTGTAAGGTTAAAGGCAGGTCGAATCATGAGAAGACACTTTGCACATATTAGTCTAAAAAATTGTC
AGTTTTATCATGAAAATGAGTCTAATGAGCACTTGCAATTAAAAGCAAAGTTATATATGAGTTTAAGTAGAGAGAATGAA
ACTATGCTCGAGCATCATTTGCCAGAAATTAATCAGATTGCAGATTTATTTGTGAATGAGACATTGGCTTTAGAAGTTCA
GTGTAGCCGACTATCAGAGCAGCGACTCAGGGAGCGAACAAAAGCATATCTACAGGCAGACTTTCAAGTGAGATGGTTAC
TAGGGGAAAAACTCTGGTTAAAGCATCGTTTAACAAATCTACATAAACAATTTTTACAATTTTCTCAAAGTATCGGATTT
CATATTTGGGAGTTAGATTTGAGGTTAGAAGTACTGAGACTAAAATATTTGATTTACGAAGATTTACGCGGACATGTCTA
TTACTTAAGTAAAACTTGCCCTCTTAGTGGAGACGTTCTAGCATTTTTGAAGTGGCCATACCAATCAAAAAATCTAAATT
TTTATAAGGTTAAACAAGACAGAAATATCAGAGATTATGTGCGTCAGCAGTTACGCTATGGCAATCAATTTTGGTTACGA
AAACAAGAAAAGGCCTACCTTTCTGGTCAGAATCTATTGACCCAAGAGCTAATGATGTTTTTTCCTCAAATACAGCCACC
ACGTGTAGATACTGATTTTTGTCAAATAACAAATTCTCTAACATCGTTTTATCAGAATTTTACAAATTATTATCAAAAAA
ATAAGAATAACTTAGACCAAACACTTTATCCCCCTGTATTTTATGATAAAATAGTCACTAAGAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae TIGR4

49.051

100

0.492

  coiA Streptococcus pneumoniae Rx1

49.051

100

0.492

  coiA Streptococcus pneumoniae D39

49.051

100

0.492

  coiA Streptococcus pneumoniae R6

49.051

100

0.492

  coiA Streptococcus mitis NCTC 12261

49.051

100

0.492

  coiA Lactococcus lactis subsp. cremoris KW2

40.062

100

0.41


Multiple sequence alignment