Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EGY10_RS14240 | Genome accession | NZ_CP033742 |
| Coordinates | 2909326..2909850 (+) | Length | 174 a.a. |
| NCBI ID | WP_003826621.1 | Uniprot ID | A0A5B0T4S2 |
| Organism | Citrobacter freundii strain FDAARGOS_550 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2904326..2914850
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGY10_RS14220 (EGY10_14230) | aphA | 2904939..2905652 (+) | 714 | WP_003826615.1 | acid phosphatase AphA | - |
| EGY10_RS14225 (EGY10_14235) | - | 2905780..2906136 (+) | 357 | WP_003031719.1 | MmcQ/YjbR family DNA-binding protein | - |
| EGY10_RS14230 (EGY10_14240) | uvrA | 2906252..2909074 (-) | 2823 | WP_003031720.1 | excinuclease ABC subunit UvrA | - |
| EGY10_RS14240 (EGY10_14245) | ssb | 2909326..2909850 (+) | 525 | WP_003826621.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| EGY10_RS14245 (EGY10_14250) | - | 2910332..2912641 (+) | 2310 | WP_016149407.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| EGY10_RS14250 (EGY10_14255) | - | 2912725..2913006 (-) | 282 | WP_003844730.1 | YjcB family protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18621.66 Da Isoelectric Point: 5.2456
>NTDB_id=325361 EGY10_RS14240 WP_003826621.1 2909326..2909850(+) (ssb) [Citrobacter freundii strain FDAARGOS_550]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=325361 EGY10_RS14240 WP_003826621.1 2909326..2909850(+) (ssb) [Citrobacter freundii strain FDAARGOS_550]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAAATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCCAGTGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGCCAACTGCGTACCCGCAAATGGACCGATCAGTCCGGCGTAGAAAAGTACACCACTGAGGTTGTTGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGCGGTGGTGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCCGCTCCGGCAGCGCCG
TCTAACGAACCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAAATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCCAGTGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGCCAACTGCGTACCCGCAAATGGACCGATCAGTCCGGCGTAGAAAAGTACACCACTGAGGTTGTTGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGCGGTGGTGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCCGCTCCGGCAGCGCCG
TCTAACGAACCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
73.889 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
56.831 |
100 |
0.598 |
| ssb | Neisseria meningitidis MC58 |
48.603 |
100 |
0.5 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.5 |