Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BUAP5A_RS02755 | Genome accession | NC_011833 |
| Coordinates | 582315..582830 (-) | Length | 171 a.a. |
| NCBI ID | WP_009874495.1 | Uniprot ID | P57610 |
| Organism | Buchnera aphidicola str. 5A (Acyrthosiphon pisum) | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 577315..587830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BUAP5A_RS02745 (BUAP5A_536) | - | 578432..580012 (-) | 1581 | WP_009874493.1 | peptide chain release factor 3 | - |
| BUAP5A_RS02750 (BUAP5A_537) | - | 581124..581702 (-) | 579 | WP_009874494.1 | NfuA family Fe-S biogenesis protein | - |
| BUAP5A_RS02755 (BUAP5A_538) | ssb | 582315..582830 (-) | 516 | WP_009874495.1 | single-stranded DNA-binding protein | Machinery gene |
| BUAP5A_RS02760 (BUAP5A_539) | dnaB | 583500..584897 (+) | 1398 | WP_009874496.1 | replicative DNA helicase | - |
| BUAP5A_RS02765 (BUAP5A_540) | gshB | 585144..586106 (+) | 963 | WP_009874497.1 | glutathione synthase | - |
| BUAP5A_RS02770 (BUAP5A_541) | ruvX | 586117..586524 (+) | 408 | WP_010896159.1 | Holliday junction resolvase RuvX | - |
| BUAP5A_RS02775 (BUAP5A_542) | - | 586642..587244 (+) | 603 | WP_009874499.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19355.77 Da Isoelectric Point: 6.1147
>NTDB_id=32532 BUAP5A_RS02755 WP_009874495.1 582315..582830(-) (ssb) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETHESNKDLTHSP
SEIDFDDEIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETHESNKDLTHSP
SEIDFDDEIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=32532 BUAP5A_RS02755 WP_009874495.1 582315..582830(-) (ssb) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
ATGGCAAGTAGAGGTGTAAATAAAGTTATTCTTATTGGTCATTTAGGTCAAGATCCCGAAGTTCGTTATATGCCTAATGG
TAATGCAGTAGTAAATATGACTTTAGCTACTTCAGAGAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTTTTATTTGGAAAATTAGCTGAAATTGCTGGTGAATATCTTCGAAAAGGTTCTCAAGTGTATATT
GAAGGATCGTTGCAAACTAGAAAATGGCAAGATCAAAATGGACTAGAACGTTATACAACAGAAATTATTGTAAATATTGG
TGGTACAATGCAAATGTTAGGCAATCGTAATTCTAACTTGCAGGCAATGACGGTAAATGACAAAAACAGTACCGGAATAA
AAATAAAAAAAACAGATGCAGTAGAGTTTGATAAAAAGATAGAAACACATGAATCGAATAAAGATTTAACTCATTCTCCT
TCGGAAATAGATTTTGATGATGAAATTCCTTTTTAA
ATGGCAAGTAGAGGTGTAAATAAAGTTATTCTTATTGGTCATTTAGGTCAAGATCCCGAAGTTCGTTATATGCCTAATGG
TAATGCAGTAGTAAATATGACTTTAGCTACTTCAGAGAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTTTTATTTGGAAAATTAGCTGAAATTGCTGGTGAATATCTTCGAAAAGGTTCTCAAGTGTATATT
GAAGGATCGTTGCAAACTAGAAAATGGCAAGATCAAAATGGACTAGAACGTTATACAACAGAAATTATTGTAAATATTGG
TGGTACAATGCAAATGTTAGGCAATCGTAATTCTAACTTGCAGGCAATGACGGTAAATGACAAAAACAGTACCGGAATAA
AAATAAAAAAAACAGATGCAGTAGAGTTTGATAAAAAGATAGAAACACATGAATCGAATAAAGATTTAACTCATTCTCCT
TCGGAAATAGATTTTGATGATGAAATTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.497 |
100 |
0.585 |
| ssb | Glaesserella parasuis strain SC1401 |
47.514 |
100 |
0.503 |
| ssb | Neisseria meningitidis MC58 |
43.182 |
100 |
0.444 |
| ssb | Neisseria gonorrhoeae MS11 |
43.182 |
100 |
0.444 |