Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   SMUNN2025_RS07345 Genome accession   NC_013928
Coordinates   1512975..1513631 (+) Length   218 a.a.
NCBI ID   WP_002264438.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1507975..1518631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS07315 (SmuNN2025_1425) - 1508211..1508465 (-) 255 WP_002262064.1 DUF3165 family protein -
  SMUNN2025_RS07320 (SmuNN2025_1426) typA 1508494..1510338 (-) 1845 WP_002262063.1 translational GTPase TypA -
  SMUNN2025_RS07325 (SmuNN2025_1428) - 1510571..1510960 (-) 390 WP_002277621.1 rhodanese-like domain-containing protein -
  SMUNN2025_RS07330 (SmuNN2025_1429) - 1510970..1511941 (-) 972 WP_002262061.1 ROK family glucokinase -
  SMUNN2025_RS07335 (SmuNN2025_1430) - 1511934..1512140 (-) 207 WP_002262060.1 YqgQ family protein -
  SMUNN2025_RS07340 (SmuNN2025_1431) dpr 1512347..1512874 (-) 528 WP_012997888.1 DNA starvation/stationary phase protection protein -
  SMUNN2025_RS07345 (SmuNN2025_1432) cclA/cilC 1512975..1513631 (+) 657 WP_002264438.1 prepilin peptidase Machinery gene
  SMUNN2025_RS07350 (SmuNN2025_1433) trpA 1513868..1514650 (-) 783 WP_002264437.1 tryptophan synthase subunit alpha -
  SMUNN2025_RS07355 (SmuNN2025_1434) trpB 1514654..1515865 (-) 1212 WP_002262056.1 tryptophan synthase subunit beta -
  SMUNN2025_RS07360 (SmuNN2025_1435) - 1515862..1516443 (-) 582 WP_002262055.1 phosphoribosylanthranilate isomerase -
  SMUNN2025_RS07365 (SmuNN2025_1436) trpC 1516430..1517197 (-) 768 WP_012997889.1 indole-3-glycerol phosphate synthase TrpC -
  SMUNN2025_RS07370 (SmuNN2025_1437) trpD 1517190..1518197 (-) 1008 WP_002280744.1 anthranilate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 24859.09 Da        Isoelectric Point: 8.5763

>NTDB_id=32439 SMUNN2025_RS07345 WP_002264438.1 1512975..1513631(+) (cclA/cilC) [Streptococcus mutans NN2025]
MKLILFFMLGASLGSFFGLVVDRYPQKSIIFPRSHCNKCYNCLTMRDLIPIFSRIINKNSCRFCGYPIPLRYSLVELLCG
LISTGFALDLLTTSQVCLLFMGVLLSLYDLQDQSYPLTLWIGFTFLLMFIYPLNLISLILFLFGIFAALKNINIGSGDFL
YLATLALSLNLQQIIWIIQIASLLGILYSLLFQKHKEPFAFVPFLFLGHLIIIFSHLI

Nucleotide


Download         Length: 657 bp        

>NTDB_id=32439 SMUNN2025_RS07345 WP_002264438.1 1512975..1513631(+) (cclA/cilC) [Streptococcus mutans NN2025]
ATGAAACTTATTTTATTTTTTATGTTGGGAGCTTCTCTTGGCTCTTTCTTTGGCTTAGTTGTTGATCGTTACCCTCAGAA
ATCTATTATATTTCCTAGAAGCCATTGCAATAAGTGTTATAACTGCTTAACCATGAGGGATCTTATCCCAATATTTTCAC
GAATCATCAACAAAAATTCTTGTCGCTTTTGCGGTTACCCTATTCCATTGCGTTATTCCTTGGTAGAATTACTCTGCGGA
CTGATTAGCACAGGTTTTGCTCTTGATTTATTAACCACTTCACAAGTATGTTTGCTCTTCATGGGAGTTCTTTTATCTCT
TTATGATTTACAAGATCAGTCTTATCCTTTGACACTGTGGATAGGCTTTACTTTTCTCTTAATGTTTATCTATCCTCTTA
ACCTAATTAGCTTAATTCTTTTTCTATTTGGTATTTTTGCTGCCCTCAAAAATATTAATATCGGAAGCGGTGATTTCCTC
TATCTGGCTACTTTGGCACTTTCTCTTAATCTTCAGCAAATTATTTGGATTATTCAGATTGCCAGTTTATTAGGAATTCT
TTACAGCCTGCTTTTTCAAAAGCACAAAGAACCCTTTGCTTTTGTTCCTTTCTTATTCTTGGGTCACCTCATTATCATTT
TCTCTCACTTGATTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

43.256

98.624

0.427

  cclA/cilC Streptococcus mitis NCTC 12261

42.326

98.624

0.417

  cclA/cilC Streptococcus pneumoniae Rx1

42.723

97.706

0.417

  cclA/cilC Streptococcus pneumoniae D39

42.723

97.706

0.417

  cclA/cilC Streptococcus pneumoniae R6

42.723

97.706

0.417

  cclA/cilC Streptococcus pneumoniae TIGR4

41.784

97.706

0.408


Multiple sequence alignment