Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EEX22_RS06480 | Genome accession | NZ_CP033598 |
| Coordinates | 1425645..1426145 (+) | Length | 166 a.a. |
| NCBI ID | WP_005725039.1 | Uniprot ID | A0A379BD60 |
| Organism | Pasteurella multocida strain CQ7 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1420645..1431145
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEX22_RS06465 (EEX22_06505) | rlmB | 1421188..1421925 (+) | 738 | WP_005725044.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| EEX22_RS06470 (EEX22_06510) | sodC | 1422011..1422571 (-) | 561 | WP_005725042.1 | superoxide dismutase family protein | - |
| EEX22_RS06475 (EEX22_06515) | uvrA | 1422642..1425473 (-) | 2832 | WP_156732382.1 | excinuclease ABC subunit UvrA | - |
| EEX22_RS06480 (EEX22_06520) | ssb | 1425645..1426145 (+) | 501 | WP_005725039.1 | single-stranded DNA-binding protein | Machinery gene |
| EEX22_RS06485 (EEX22_06525) | - | 1426231..1426584 (-) | 354 | WP_156732383.1 | hypothetical protein | - |
| EEX22_RS06490 (EEX22_06530) | folD | 1426654..1427508 (-) | 855 | WP_156732384.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| EEX22_RS06505 (EEX22_06545) | - | 1428151..1428570 (+) | 420 | WP_005719426.1 | DUF417 family protein | - |
| EEX22_RS06510 (EEX22_06550) | lipA | 1428648..1429610 (-) | 963 | WP_005755556.1 | lipoyl synthase | - |
| EEX22_RS06515 (EEX22_06555) | lipB | 1429675..1430331 (-) | 657 | WP_156732385.1 | lipoyl(octanoyl) transferase LipB | - |
| EEX22_RS06520 (EEX22_06560) | ybeD | 1430338..1430634 (-) | 297 | WP_005719420.1 | DUF493 family protein YbeD | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18657.68 Da Isoelectric Point: 5.3353
>NTDB_id=324191 EEX22_RS06480 WP_005725039.1 1425645..1426145(+) (ssb) [Pasteurella multocida strain CQ7]
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLDSRNERQQTGGYAPQTAAPQYNAPTGGYGAQPSRPATKPAPQNEPPMDMGFE
EDNIPF
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLDSRNERQQTGGYAPQTAAPQYNAPTGGYGAQPSRPATKPAPQNEPPMDMGFE
EDNIPF
Nucleotide
Download Length: 501 bp
>NTDB_id=324191 EEX22_RS06480 WP_005725039.1 1425645..1426145(+) (ssb) [Pasteurella multocida strain CQ7]
ATGGCTGGAGTAAATAAAGTAATTATTGTAGGGAACTTAGGTAACGATCCTGAAATCCGCACAATGCCAAATGGTGAAGC
CGTAGCCAATATCAGCGTCGCGACCAGTGAAAGCTGGATCGACAAAAATACTAACGAACGTCGTGAAGTCACCGAATGGC
ATCGCATCGTATTCTACCGTCGTCAAGCTGAAGTGGCTGGGGAATATCTGCGTAAAGGTTCAAAAGTGTATGTAGAAGGA
CGCCTCAAAACCCGTAAATGGCAAGACCAAAATGGGCAAGATCGCTACACTACCGAAATCCAAGGCGACGTGTTACAAAT
GCTCGACAGCCGTAACGAACGTCAACAAACCGGCGGCTACGCCCCACAAACCGCTGCGCCACAATATAATGCCCCAACAG
GTGGCTACGGTGCACAACCTTCTCGTCCAGCGACAAAACCCGCTCCACAAAACGAACCTCCAATGGACATGGGCTTTGAG
GAAGATAATATTCCGTTTTAA
ATGGCTGGAGTAAATAAAGTAATTATTGTAGGGAACTTAGGTAACGATCCTGAAATCCGCACAATGCCAAATGGTGAAGC
CGTAGCCAATATCAGCGTCGCGACCAGTGAAAGCTGGATCGACAAAAATACTAACGAACGTCGTGAAGTCACCGAATGGC
ATCGCATCGTATTCTACCGTCGTCAAGCTGAAGTGGCTGGGGAATATCTGCGTAAAGGTTCAAAAGTGTATGTAGAAGGA
CGCCTCAAAACCCGTAAATGGCAAGACCAAAATGGGCAAGATCGCTACACTACCGAAATCCAAGGCGACGTGTTACAAAT
GCTCGACAGCCGTAACGAACGTCAACAAACCGGCGGCTACGCCCCACAAACCGCTGCGCCACAATATAATGCCCCAACAG
GTGGCTACGGTGCACAACCTTCTCGTCCAGCGACAAAACCCGCTCCACAAAACGAACCTCCAATGGACATGGGCTTTGAG
GAAGATAATATTCCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
69.231 |
100 |
0.759 |
| ssb | Vibrio cholerae strain A1552 |
53.591 |
100 |
0.584 |
| ssb | Neisseria meningitidis MC58 |
44.068 |
100 |
0.47 |
| ssb | Neisseria gonorrhoeae MS11 |
44.068 |
100 |
0.47 |