Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | EEA47_RS07280 | Genome accession | NZ_CP033457 |
| Coordinates | 1525209..1525853 (+) | Length | 214 a.a. |
| NCBI ID | WP_005381237.1 | Uniprot ID | A0A2I3CB98 |
| Organism | Vibrio alginolyticus strain SNU_SP1 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
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Genomic Context
Location: 1520209..1530853
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEA47_RS07265 (EEA47_07520) | - | 1520677..1522122 (-) | 1446 | WP_054579427.1 | hypothetical protein | - |
| EEA47_RS07270 (EEA47_07525) | csrD | 1522134..1524143 (-) | 2010 | WP_191116183.1 | RNase E specificity factor CsrD | - |
| EEA47_RS07275 (EEA47_07530) | ssb | 1524386..1524931 (-) | 546 | WP_054579428.1 | single-stranded DNA-binding protein | Machinery gene |
| EEA47_RS07280 (EEA47_07535) | qstR | 1525209..1525853 (+) | 645 | WP_005381237.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| EEA47_RS07285 (EEA47_07540) | galU | 1526013..1526885 (+) | 873 | WP_005381239.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| EEA47_RS07290 (EEA47_07545) | uvrA | 1527035..1529857 (+) | 2823 | WP_033907424.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24397.32 Da Isoelectric Point: 9.8721
>NTDB_id=323803 EEA47_RS07280 WP_005381237.1 1525209..1525853(+) (qstR) [Vibrio alginolyticus strain SNU_SP1]
MRKSAYARKLFLISMEDNAQKKVAALEKYVDMSIPVISTAALMEAKPQHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLSFGQLKGVFYSEDTLEQIGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MRKSAYARKLFLISMEDNAQKKVAALEKYVDMSIPVISTAALMEAKPQHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLSFGQLKGVFYSEDTLEQIGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=323803 EEA47_RS07280 WP_005381237.1 1525209..1525853(+) (qstR) [Vibrio alginolyticus strain SNU_SP1]
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATCAGTATGGAAGATAATGCGCAAAAAAAAGTGGCGGCACTCGA
AAAGTACGTTGATATGAGCATCCCGGTGATTTCAACCGCAGCACTCATGGAAGCCAAGCCACAACACCGTAATAAAATTC
TACTGATCGACTTCAGTGAACATAAATCACTTGTTCAATCGATCAAAAACTTGCCTCTTGTATGGAAAAACTTTGAAACC
GTTGTATTCAACGTGCCTAAAAGACTAACCACAGATGAACTTCTTTCATTTGGTCAATTAAAAGGTGTGTTTTATTCTGA
AGATACGCTAGAGCAAATTGGAGAAGGGTTAAAAGGCATTGTTAACGGTCAAAACTGGCTGCCGCGTAATGTAACCAGTC
AACTTTTACACTATTACCGCAATGTCATTAATACTCATACTGCACCAGCTACGGTAGACCTAACCATTCGTGAGCTACAA
GTACTGCGTTGCCTACAAGCTGGCGCCTCGAACAGTCAGATGGCCGAGGAGTTATTCGTTAGTGAATTCACCATCAAATC
GCACTTGTATCAGATATTCAAAAAGCTATCCGTAAAGAACCGAGTACAGGCAATCGCCTGGGCAGACCAAAACTTAATGT
CATGA
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATCAGTATGGAAGATAATGCGCAAAAAAAAGTGGCGGCACTCGA
AAAGTACGTTGATATGAGCATCCCGGTGATTTCAACCGCAGCACTCATGGAAGCCAAGCCACAACACCGTAATAAAATTC
TACTGATCGACTTCAGTGAACATAAATCACTTGTTCAATCGATCAAAAACTTGCCTCTTGTATGGAAAAACTTTGAAACC
GTTGTATTCAACGTGCCTAAAAGACTAACCACAGATGAACTTCTTTCATTTGGTCAATTAAAAGGTGTGTTTTATTCTGA
AGATACGCTAGAGCAAATTGGAGAAGGGTTAAAAGGCATTGTTAACGGTCAAAACTGGCTGCCGCGTAATGTAACCAGTC
AACTTTTACACTATTACCGCAATGTCATTAATACTCATACTGCACCAGCTACGGTAGACCTAACCATTCGTGAGCTACAA
GTACTGCGTTGCCTACAAGCTGGCGCCTCGAACAGTCAGATGGCCGAGGAGTTATTCGTTAGTGAATTCACCATCAAATC
GCACTTGTATCAGATATTCAAAAAGCTATCCGTAAAGAACCGAGTACAGGCAATCGCCTGGGCAGACCAAAACTTAATGT
CATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
94.86 |
100 |
0.949 |
| qstR | Vibrio campbellii strain DS40M4 |
89.252 |
100 |
0.893 |
| qstR | Vibrio cholerae strain A1552 |
51.869 |
100 |
0.519 |