Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | LLKF_RS12455 | Genome accession | NC_013656 |
| Coordinates | 2528535..2529128 (-) | Length | 197 a.a. |
| NCBI ID | WP_003131995.1 | Uniprot ID | Q9CDL2 |
| Organism | Lactococcus lactis subsp. lactis KF147 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2523535..2534128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLKF_RS12430 (LLKF_2474) | - | 2523560..2524177 (-) | 618 | WP_012898695.1 | AAA family ATPase | - |
| LLKF_RS12435 (LLKF_2475) | - | 2524174..2525358 (-) | 1185 | WP_012898696.1 | ABC transporter permease | - |
| LLKF_RS12440 (LLKF_2476) | - | 2525597..2526166 (-) | 570 | WP_012898697.1 | hypothetical protein | - |
| LLKF_RS12445 (LLKF_2477) | - | 2526386..2527270 (-) | 885 | WP_012898698.1 | XRE/MutR family transcriptional regulator | - |
| LLKF_RS12450 (LLKF_2478) | ruvB | 2527407..2528408 (-) | 1002 | WP_003131994.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| LLKF_RS12455 (LLKF_2479) | ruvA | 2528535..2529128 (-) | 594 | WP_003131995.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| LLKF_RS12460 (LLKF_2480) | hexB | 2529241..2531211 (-) | 1971 | WP_012898699.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| LLKF_RS12465 (LLKF_2481) | - | 2531340..2532035 (-) | 696 | WP_012898700.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21166.73 Da Isoelectric Point: 5.8174
>NTDB_id=32130 LLKF_RS12455 WP_003131995.1 2528535..2529128(-) (ruvA) [Lactococcus lactis subsp. lactis KF147]
MFEYLNGKLVKISPTNIVIDVAGIGYLISVANPYAWSALMNTEVKIYVHQVIREDAHSLYGFVNEAEKALFLRLISVSGI
GPKSALAIIAAADNEGLITAIDNSDIKYLTKFPGVGKKTAMQMVLDLAGKFDATGTVGISLLDAGPAGNLALEEAIEALQ
ALGYKATELKKIEKKLAQETGLTSEEYIKSALKLMMK
MFEYLNGKLVKISPTNIVIDVAGIGYLISVANPYAWSALMNTEVKIYVHQVIREDAHSLYGFVNEAEKALFLRLISVSGI
GPKSALAIIAAADNEGLITAIDNSDIKYLTKFPGVGKKTAMQMVLDLAGKFDATGTVGISLLDAGPAGNLALEEAIEALQ
ALGYKATELKKIEKKLAQETGLTSEEYIKSALKLMMK
Nucleotide
Download Length: 594 bp
>NTDB_id=32130 LLKF_RS12455 WP_003131995.1 2528535..2529128(-) (ruvA) [Lactococcus lactis subsp. lactis KF147]
ATGTTTGAATATCTTAATGGAAAATTAGTAAAAATTTCCCCAACAAATATTGTAATTGATGTAGCAGGAATTGGTTATCT
TATCAGTGTAGCTAACCCTTACGCTTGGTCTGCTTTGATGAACACAGAAGTAAAAATTTATGTTCATCAAGTCATTCGCG
AAGATGCCCACAGCCTCTATGGTTTTGTTAACGAGGCCGAAAAAGCTTTATTCTTACGTCTGATCAGTGTTTCTGGGATT
GGGCCAAAATCAGCTCTGGCCATCATTGCGGCGGCTGATAACGAAGGTTTAATCACTGCTATTGACAATAGTGATATCAA
GTATTTAACTAAATTTCCAGGAGTTGGTAAAAAAACAGCCATGCAGATGGTGCTTGATTTGGCTGGGAAATTTGATGCGA
CAGGAACTGTAGGTATTTCTCTTCTTGATGCTGGACCTGCTGGCAATCTTGCTTTGGAAGAAGCGATTGAAGCGCTGCAA
GCTTTGGGTTATAAAGCAACAGAATTGAAGAAAATTGAGAAAAAATTAGCTCAAGAAACAGGTCTGACCAGCGAAGAATA
TATCAAATCAGCCTTAAAACTTATGATGAAATAA
ATGTTTGAATATCTTAATGGAAAATTAGTAAAAATTTCCCCAACAAATATTGTAATTGATGTAGCAGGAATTGGTTATCT
TATCAGTGTAGCTAACCCTTACGCTTGGTCTGCTTTGATGAACACAGAAGTAAAAATTTATGTTCATCAAGTCATTCGCG
AAGATGCCCACAGCCTCTATGGTTTTGTTAACGAGGCCGAAAAAGCTTTATTCTTACGTCTGATCAGTGTTTCTGGGATT
GGGCCAAAATCAGCTCTGGCCATCATTGCGGCGGCTGATAACGAAGGTTTAATCACTGCTATTGACAATAGTGATATCAA
GTATTTAACTAAATTTCCAGGAGTTGGTAAAAAAACAGCCATGCAGATGGTGCTTGATTTGGCTGGGAAATTTGATGCGA
CAGGAACTGTAGGTATTTCTCTTCTTGATGCTGGACCTGCTGGCAATCTTGCTTTGGAAGAAGCGATTGAAGCGCTGCAA
GCTTTGGGTTATAAAGCAACAGAATTGAAGAAAATTGAGAAAAAATTAGCTCAAGAAACAGGTCTGACCAGCGAAGAATA
TATCAAATCAGCCTTAAAACTTATGATGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae TIGR4 |
60.101 |
100 |
0.604 |
| ruvA | Streptococcus pneumoniae R6 |
60.101 |
100 |
0.604 |
| ruvA | Streptococcus pneumoniae D39 |
60.101 |
100 |
0.604 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
44.828 |
100 |
0.462 |