Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D9M09_RS25705 | Genome accession | NZ_CP033019 |
| Coordinates | 5684947..5685462 (-) | Length | 171 a.a. |
| NCBI ID | WP_034754418.1 | Uniprot ID | A0A853SUJ8 |
| Organism | Janthinobacterium agaricidamnosum strain BHSEK | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5679947..5690462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9M09_RS25675 (D9M09_25675) | - | 5680571..5681137 (-) | 567 | WP_121670682.1 | GNAT family N-acetyltransferase | - |
| D9M09_RS25680 (D9M09_25680) | - | 5681303..5682151 (+) | 849 | WP_083287363.1 | hypothetical protein | - |
| D9M09_RS25685 (D9M09_25685) | - | 5682158..5682664 (-) | 507 | WP_162995795.1 | GNAT family N-acetyltransferase | - |
| D9M09_RS25690 (D9M09_25690) | - | 5682806..5683585 (-) | 780 | WP_070291911.1 | acetoin reductase | - |
| D9M09_RS25695 (D9M09_25695) | - | 5683874..5684290 (+) | 417 | WP_070291905.1 | hypothetical protein | - |
| D9M09_RS25700 (D9M09_25700) | - | 5684287..5684796 (-) | 510 | WP_205602307.1 | DUF1203 domain-containing protein | - |
| D9M09_RS25705 (D9M09_25705) | ssb | 5684947..5685462 (-) | 516 | WP_034754418.1 | single-stranded DNA-binding protein | Machinery gene |
| D9M09_RS25710 (D9M09_25710) | uvrA | 5685844..5688693 (+) | 2850 | WP_121670684.1 | excinuclease ABC subunit UvrA | - |
| D9M09_RS25715 (D9M09_25715) | - | 5688761..5689555 (-) | 795 | WP_162995796.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18192.35 Da Isoelectric Point: 5.9416
>NTDB_id=320503 D9M09_RS25705 WP_034754418.1 5684947..5685462(-) (ssb) [Janthinobacterium agaricidamnosum strain BHSEK]
MASVNKVIIVGNLGRDPEIRYMPSGDAIANIAVATSYKSKDRNTGEQKELTEWHRISFFGRLAEIVGQYLKKGSSVYVEG
RLQTRKYTDKDGVEKYATDIIAEQMQMLGGRSGMGGDAGGGDDSYGGGGGGGYDAPAPRQAPAPRPAPAPAPRPAPKPAP
NFSDMDDDIPF
MASVNKVIIVGNLGRDPEIRYMPSGDAIANIAVATSYKSKDRNTGEQKELTEWHRISFFGRLAEIVGQYLKKGSSVYVEG
RLQTRKYTDKDGVEKYATDIIAEQMQMLGGRSGMGGDAGGGDDSYGGGGGGGYDAPAPRQAPAPRPAPAPAPRPAPKPAP
NFSDMDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=320503 D9M09_RS25705 WP_034754418.1 5684947..5685462(-) (ssb) [Janthinobacterium agaricidamnosum strain BHSEK]
ATGGCATCAGTCAACAAAGTCATCATCGTCGGCAATCTGGGCCGTGACCCGGAAATCCGCTACATGCCTAGCGGCGACGC
GATCGCCAACATCGCCGTGGCCACTTCGTACAAATCGAAGGACCGCAACACGGGCGAACAAAAAGAATTGACAGAGTGGC
ACCGTATCTCGTTCTTCGGCCGCCTGGCGGAAATCGTCGGCCAATACCTGAAAAAAGGCTCGTCCGTCTACGTCGAAGGC
CGTCTGCAAACCCGTAAATACACGGACAAGGACGGCGTCGAGAAGTATGCGACCGACATCATCGCGGAACAGATGCAAAT
GCTGGGCGGCCGTTCCGGCATGGGCGGCGACGCCGGCGGTGGCGATGACAGCTACGGTGGTGGCGGTGGCGGCGGTTACG
ACGCCCCGGCCCCGCGCCAGGCGCCAGCCCCGCGTCCAGCTCCGGCACCGGCGCCACGCCCGGCACCGAAGCCAGCGCCG
AACTTCTCGGATATGGATGACGACATTCCGTTCTGA
ATGGCATCAGTCAACAAAGTCATCATCGTCGGCAATCTGGGCCGTGACCCGGAAATCCGCTACATGCCTAGCGGCGACGC
GATCGCCAACATCGCCGTGGCCACTTCGTACAAATCGAAGGACCGCAACACGGGCGAACAAAAAGAATTGACAGAGTGGC
ACCGTATCTCGTTCTTCGGCCGCCTGGCGGAAATCGTCGGCCAATACCTGAAAAAAGGCTCGTCCGTCTACGTCGAAGGC
CGTCTGCAAACCCGTAAATACACGGACAAGGACGGCGTCGAGAAGTATGCGACCGACATCATCGCGGAACAGATGCAAAT
GCTGGGCGGCCGTTCCGGCATGGGCGGCGACGCCGGCGGTGGCGATGACAGCTACGGTGGTGGCGGTGGCGGCGGTTACG
ACGCCCCGGCCCCGCGCCAGGCGCCAGCCCCGCGTCCAGCTCCGGCACCGGCGCCACGCCCGGCACCGAAGCCAGCGCCG
AACTTCTCGGATATGGATGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
51.111 |
100 |
0.538 |
| ssb | Neisseria meningitidis MC58 |
50.556 |
100 |
0.532 |
| ssb | Glaesserella parasuis strain SC1401 |
49.724 |
100 |
0.526 |
| ssb | Vibrio cholerae strain A1552 |
50.279 |
100 |
0.526 |