Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | D9C16_RS13865 | Genome accession | NZ_CP032861 |
| Coordinates | 2545884..2546402 (+) | Length | 172 a.a. |
| NCBI ID | WP_003219228.1 | Uniprot ID | A0A063XE16 |
| Organism | Bacillus subtilis subsp. subtilis strain N1-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2540884..2551402
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C16_RS13845 (D9C16_13845) | yyzM | 2541958..2542164 (+) | 207 | WP_003226838.1 | DUF951 family protein | - |
| D9C16_RS13850 (D9C16_13850) | yyaE | 2542215..2544218 (+) | 2004 | WP_014481509.1 | molybdopterin-dependent oxidoreductase | - |
| D9C16_RS13855 (D9C16_13855) | ychF | 2544345..2545445 (+) | 1101 | WP_003242727.1 | redox-regulated ATPase YchF | - |
| D9C16_RS13860 (D9C16_13860) | rpsF | 2545556..2545843 (+) | 288 | WP_003244064.1 | 30S ribosomal protein S6 | - |
| D9C16_RS13865 (D9C16_13865) | ssbA | 2545884..2546402 (+) | 519 | WP_003219228.1 | single-stranded DNA-binding protein SsbA | Machinery gene |
| D9C16_RS13870 (D9C16_13870) | rpsR | 2546446..2546685 (+) | 240 | WP_003219224.1 | 30S ribosomal protein S18 | - |
| D9C16_RS13875 (D9C16_13875) | xth | 2546750..2547508 (+) | 759 | WP_014481508.1 | exodeoxyribonuclease III | - |
| D9C16_RS13880 (D9C16_13880) | ccpB | 2547568..2547942 (+) | 375 | Protein_2674 | transcriptional regulator CcpB | - |
| D9C16_RS13885 (D9C16_13885) | - | 2548862..2550136 (-) | 1275 | WP_014481505.1 | MFS transporter | - |
| D9C16_RS13890 (D9C16_13890) | - | 2550114..2551142 (-) | 1029 | WP_014481504.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18742.31 Da Isoelectric Point: 4.7621
>NTDB_id=319581 D9C16_RS13865 WP_003219228.1 2545884..2546402(+) (ssbA) [Bacillus subtilis subsp. subtilis strain N1-1]
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=319581 D9C16_RS13865 WP_003219228.1 2545884..2546402(+) (ssbA) [Bacillus subtilis subsp. subtilis strain N1-1]
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.192 |
100 |
0.599 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
61.628 |
0.395 |
| ssb | Glaesserella parasuis strain SC1401 |
35.519 |
100 |
0.378 |