Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D8S77_RS01810 | Genome accession | NZ_CP032700 |
| Coordinates | 336324..336815 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain TSPY556 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 331324..341815
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8S77_RS01780 (D8S77_01785) | - | 332513..333013 (+) | 501 | WP_161230218.1 | phosphatase PAP2 family protein | - |
| D8S77_RS01785 (D8S77_01790) | trxA | 333076..333408 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| D8S77_RS01790 (D8S77_01795) | - | 333460..334047 (-) | 588 | WP_076639280.1 | helix-turn-helix domain-containing protein | - |
| D8S77_RS01795 (D8S77_01800) | mutY | 334224..335378 (-) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| D8S77_RS01800 (D8S77_01805) | - | 335546..335839 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| D8S77_RS01805 (D8S77_01810) | rpsF | 336012..336302 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| D8S77_RS01810 (D8S77_01815) | ssb | 336324..336815 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| D8S77_RS01815 (D8S77_01820) | rpsR | 336980..337219 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| D8S77_RS01820 (D8S77_01825) | - | 337352..338008 (-) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| D8S77_RS01825 (D8S77_01830) | - | 338140..339084 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=318312 D8S77_RS01810 WP_002983122.1 336324..336815(+) (ssb) [Streptococcus pyogenes strain TSPY556]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=318312 D8S77_RS01810 WP_002983122.1 336324..336815(+) (ssb) [Streptococcus pyogenes strain TSPY556]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACGCTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTTATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCGTCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACGCTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTTATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCGTCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |