Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   D7D53_RS06490 Genome accession   NZ_CP032621
Coordinates   1334211..1334870 (+) Length   219 a.a.
NCBI ID   WP_120770493.1    Uniprot ID   -
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1329211..1339870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS06450 (D7D53_06450) mgaSpn 1329466..1330944 (-) 1479 WP_120770489.1 virulence factor transcriptional regulator MgaSpn -
  D7D53_RS06455 (D7D53_06455) - 1331320..1331556 (+) 237 WP_120770490.1 GlsB/YeaQ/YmgE family stress response membrane protein -
  D7D53_RS06460 (D7D53_06460) amaP 1331640..1332212 (+) 573 WP_020901648.1 alkaline shock response membrane anchor protein AmaP -
  D7D53_RS06465 (D7D53_06465) - 1332224..1332394 (+) 171 WP_000455064.1 DUF2273 domain-containing protein -
  D7D53_RS06470 (D7D53_06470) - 1332434..1333030 (+) 597 WP_120770491.1 Asp23/Gls24 family envelope stress response protein -
  D7D53_RS06475 (D7D53_06475) - 1333061..1333264 (+) 204 WP_000109960.1 CsbD family protein -
  D7D53_RS10355 (D7D53_06480) - 1333374..1333670 (-) 297 Protein_1252 transposase -
  D7D53_RS06485 (D7D53_06485) - 1333686..1334141 (-) 456 WP_120770492.1 GNAT family N-acetyltransferase -
  D7D53_RS06490 (D7D53_06490) cclA/cilC 1334211..1334870 (+) 660 WP_120770493.1 prepilin peptidase Machinery gene
  D7D53_RS06495 (D7D53_06495) trpA 1334830..1335618 (-) 789 WP_120770494.1 tryptophan synthase subunit alpha -
  D7D53_RS06500 (D7D53_06500) trpB 1335611..1336834 (-) 1224 WP_000331265.1 tryptophan synthase subunit beta -
  D7D53_RS06505 (D7D53_06505) - 1336812..1337411 (-) 600 WP_162927885.1 phosphoribosylanthranilate isomerase -
  D7D53_RS06510 (D7D53_06510) trpC 1337398..1338165 (-) 768 WP_120770496.1 indole-3-glycerol phosphate synthase TrpC -
  D7D53_RS06515 (D7D53_06515) trpD 1338162..1339166 (-) 1005 WP_120770497.1 anthranilate phosphoribosyltransferase -
  D7D53_RS06520 (D7D53_06520) - 1339177..1339743 (-) 567 WP_042900462.1 aminodeoxychorismate/anthranilate synthase component II -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24712.01 Da        Isoelectric Point: 7.5761

>NTDB_id=317197 D7D53_RS06490 WP_120770493.1 1334211..1334870(+) (cclA/cilC) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MINIYFFLVGSILASFLGLVIDRFPEQSIISPASHCDSCQTPLRPLDLIPILSQVLNRFRCRYCKAPYPVWYALFELGLG
LIFLLYSWELLPLGQVILITAGLTLGIYDFRHQEYPLLVWIVFHLLLIVCSGWNLVMIFLLVLGILAHFIDIRMGAGDFL
FLASCALVFSATELLILIQFASATGILAFLLQKKKERLPFVPFLLLATCVIVFGKLLLV

Nucleotide


Download         Length: 660 bp        

>NTDB_id=317197 D7D53_RS06490 WP_120770493.1 1334211..1334870(+) (cclA/cilC) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGATTAATATTTATTTTTTTCTTGTCGGGAGCATTCTCGCTTCCTTTCTTGGTTTGGTTATTGACCGTTTCCCAGAGCA
ATCCATTATCAGCCCAGCCAGTCACTGCGATTCCTGTCAGACTCCTTTACGTCCCTTAGATTTGATTCCGATTCTCTCAC
AGGTACTCAATCGCTTTCGCTGTCGCTACTGCAAGGCTCCTTATCCTGTCTGGTATGCCCTCTTTGAACTAGGCTTAGGA
CTCATATTTCTGCTTTACTCTTGGGAATTGCTTCCCTTGGGGCAAGTCATCCTAATCACTGCTGGTTTGACCTTGGGCAT
CTACGACTTTCGCCATCAGGAATATCCCTTACTGGTCTGGATTGTCTTTCATCTACTCCTAATAGTCTGCTCCGGCTGGA
ATTTGGTCATGATCTTCCTCCTTGTTCTTGGAATTTTGGCTCATTTTATTGATATTCGCATGGGCGCAGGGGATTTCCTC
TTTTTAGCTTCTTGCGCTCTCGTCTTTAGTGCGACCGAATTACTGATCTTGATTCAGTTTGCTTCTGCAACAGGAATTCT
AGCCTTTCTCCTACAAAAGAAAAAGGAAAGACTTCCTTTTGTGCCTTTCCTCTTACTCGCTACTTGTGTGATTGTTTTTG
GTAAGTTACTGCTTGTTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

90.868

100

0.909
  cclA/cilC Streptococcus pneumoniae Rx1

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae D39

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae R6

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae TIGR4

88.128

100

0.881
  cclA/cilC Streptococcus mitis NCTC 12261

85.388

100

0.854

Multiple sequence alignment