Detailed information    

insolico Bioinformatically predicted

Overview

Name   micB   Type   Regulator
Locus tag   D7D53_RS03895 Genome accession   NZ_CP032621
Coordinates   787449..788798 (+) Length   449 a.a.
NCBI ID   WP_120770194.1    Uniprot ID   A0A387B1Q5
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 782449..793798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS03860 (D7D53_03860) - 782599..783417 (+) 819 WP_033681742.1 NAD kinase -
  D7D53_RS03865 (D7D53_03865) - 783414..784310 (+) 897 WP_120770192.1 RluA family pseudouridine synthase -
  D7D53_RS03870 (D7D53_03870) pta 784354..785328 (+) 975 WP_000451571.1 phosphate acetyltransferase -
  D7D53_RS03885 (D7D53_03885) mutY 785518..786693 (+) 1176 WP_120770193.1 A/G-specific adenine glycosylase -
  D7D53_RS03890 (D7D53_03890) micA 786749..787456 (+) 708 WP_033681745.1 response regulator YycF Regulator
  D7D53_RS03895 (D7D53_03895) micB 787449..788798 (+) 1350 WP_120770194.1 cell wall metabolism sensor histidine kinase VicK Regulator
  D7D53_RS03900 (D7D53_03900) vicX 788800..789609 (+) 810 WP_120770195.1 MBL fold metallo-hydrolase Regulator
  D7D53_RS03905 (D7D53_03905) - 789641..789988 (-) 348 WP_120770196.1 PedC/BrcD family bacteriocin maturation disulfide isomerase -
  D7D53_RS03910 (D7D53_03910) - 790100..791818 (-) 1719 WP_120770197.1 phospho-sugar mutase -

Sequence

Protein


Download         Length: 449 a.a.        Molecular weight: 51555.06 Da        Isoelectric Point: 4.7719

>NTDB_id=317188 D7D53_RS03895 WP_120770194.1 787449..788798(+) (micB) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MIELIRKNILTSDFIFILILLGFILIVTLLLLENRRDNIRLKQINQKVKDLIAGDYSQVLDMQGSSEITNITNNLNDLSE
VIRLTQENLEQESKRLHSILSYMTDGVLATNRRGKITMINDMAKKQLGVQKEEVLNKSILELLKIEDEYELRDLITQVPE
LMIDSQDDNGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMRGSDEEKKYELVRDYPITSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVTMKTTDDQMILSISDQGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLG
LSIAKEIIKQHKGFIWAKSEYGKGSTFTIVLPYDKDAVKEEVWEDEVED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=317188 D7D53_RS03895 WP_120770194.1 787449..788798(+) (micB) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGATTGAATTGATTAGAAAAAATATTCTTACTAGTGATTTTATCTTCATTTTAATTTTATTGGGTTTTATCTTGATTGT
TACCTTGCTCTTACTAGAAAATCGGCGGGATAATATTCGGTTGAAGCAGATTAATCAAAAAGTTAAAGACTTGATTGCAG
GAGATTATTCGCAGGTATTGGATATGCAGGGAAGCTCTGAAATCACTAATATTACCAATAATCTTAATGATTTATCAGAA
GTAATCCGTTTGACCCAAGAAAATCTGGAACAAGAGAGTAAACGATTGCACAGTATCCTCTCATACATGACAGACGGAGT
CCTTGCAACCAATCGTCGTGGCAAGATTACTATGATTAATGACATGGCTAAGAAACAGCTAGGTGTTCAGAAAGAAGAGG
TTCTCAATAAAAGTATTCTAGAATTGCTTAAGATTGAAGATGAGTATGAACTTCGTGATTTGATTACCCAAGTTCCTGAG
CTTATGATTGATTCTCAGGATGACAATGGTGAGTATCTGAGCCTTCGTGTACGCTTTGCCTTGGTGCGTCGTGAGTCTGG
CTTTATCTCAGGTTTGGTTGCAGTTTTACACGATACGACGGAGCAGGAGAAGGAAGAACGAGAACGAAGACTCTTTGTTT
CCAACGTTAGTCATGAGCTACGGACGCCTCTGACCAGCGTAAAATCCTATCTTGAAGCCTTGGATGAGGGTGCCTTGTCA
GAACCTGTAGCGCCAGACTTTATCAAGGTATCTCTAGACGAAACCAACCGTATGATGCGAATGGTGACAGATCTTCTCCA
TCTTTCACGGATTGATAATGCGACCAGTCACCTAGATGTGGAACTGATTAACTTTACTGCCTTTATTACCTTTATTCTTA
ACCGTTTTGATAAGATGAGGGGATCAGATGAAGAGAAGAAATACGAATTGGTTAGAGATTATCCGATTACGTCTGTCTGG
ATTGAAATTGATACAGACAAAATGACGCAGGTGATTGATAATATTCTTAACAATGCCATTAAGTATTCACCAGATGGTGG
GAAAATCACAGTGACCATGAAGACAACTGATGATCAGATGATTTTATCTATCTCAGACCAAGGTTTGGGTATTCCTAAGC
AGGATTTACCACGTATTTTTGACCGTTTTTATCGTGTTGATCGTGCCAGAAGTCGTGCCCAAGGTGGTACAGGCCTAGGA
CTGTCCATTGCTAAAGAAATTATCAAACAACATAAGGGCTTTATTTGGGCCAAGAGTGAATACGGTAAGGGATCAACCTT
CACCATTGTGTTACCTTATGATAAGGATGCAGTGAAAGAAGAAGTATGGGAGGACGAAGTAGAAGACTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(324-434)

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

PAS fold (PAS)

(95-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387B1Q5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

90.205

97.773

0.882
  vicK Streptococcus mutans UA159

72.139

89.532

0.646

Multiple sequence alignment