Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   D7D53_RS03900 Genome accession   NZ_CP032621
Coordinates   788800..789609 (+) Length   269 a.a.
NCBI ID   WP_120770195.1    Uniprot ID   A0A387B347
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 783800..794609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS03870 (D7D53_03870) pta 784354..785328 (+) 975 WP_000451571.1 phosphate acetyltransferase -
  D7D53_RS03885 (D7D53_03885) mutY 785518..786693 (+) 1176 WP_120770193.1 A/G-specific adenine glycosylase -
  D7D53_RS03890 (D7D53_03890) micA 786749..787456 (+) 708 WP_033681745.1 response regulator YycF Regulator
  D7D53_RS03895 (D7D53_03895) micB 787449..788798 (+) 1350 WP_120770194.1 cell wall metabolism sensor histidine kinase VicK Regulator
  D7D53_RS03900 (D7D53_03900) vicX 788800..789609 (+) 810 WP_120770195.1 MBL fold metallo-hydrolase Regulator
  D7D53_RS03905 (D7D53_03905) - 789641..789988 (-) 348 WP_120770196.1 PedC/BrcD family bacteriocin maturation disulfide isomerase -
  D7D53_RS03910 (D7D53_03910) - 790100..791818 (-) 1719 WP_120770197.1 phospho-sugar mutase -
  D7D53_RS03915 (D7D53_03915) - 791971..793872 (+) 1902 WP_120770198.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29978.98 Da        Isoelectric Point: 6.1738

>NTDB_id=317189 D7D53_RS03900 WP_120770195.1 788800..789609(+) (vicX) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MSETGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDFSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=317189 D7D53_RS03900 WP_120770195.1 788800..789609(+) (vicX) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAGTGAAACAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCTAAAAA
GAAGCTTTTAGTGGATGCAGGCTTGTCTGGTAAGAAAATTACCAGCCTACTTGCTGAAATTAACCGTAAACCCGAGGACC
TGGATGCCATCTTGATTACACATGAGCATTCAGACCATATCCACGGAGTGGGAGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCAATGGAAAATAGCAAGTACCTTGGAAAGGTAGATTTTTCGCAAAAGCATAT
CTTTGAAATGGGTAAAACCAAAACCTTTGGAGATATCGACATCGAGAGTTTTGGTGTTAGCCACGATGCGGTTGCACCGC
AGTTTTATCGCTTTATGAAGGATGATAAGAGTTTTGTCATGCTGACTGATACAGGTTATGTGAGTGACCGTATGGCAGGG
ATTGTCGAAAATGCAGATGGCTACCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCTGATCTGGGGCATCTTTCTAACGAGGATGGTGCTGAAGCAATGATTCGGACACTTGGGA
ATCGCACTAAGAAAATCTACCTTGGACATTTATCTAAGGAAAATAATATCAAGGAACTGGCTCACATGACCATGGTCAAT
CAGCTAGCCCAAGCTGATTTAGGTGTAGGAGTAGACTTTAAGGTTTACGATACATCACCAGATACCGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387B347

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment