Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   CDG62_RS18425 Genome accession   NZ_CP032286
Coordinates   3255156..3256289 (+) Length   377 a.a.
NCBI ID   WP_087528681.1    Uniprot ID   A0A385NDT0
Organism   Acinetobacter sp. WCHA55     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3250156..3261289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG62_RS18405 (CDG62_18410) - 3250688..3252733 (-) 2046 WP_087528677.1 TonB-dependent copper receptor -
  CDG62_RS18410 (CDG62_18415) - 3252806..3253243 (-) 438 WP_087528678.1 DUF2946 family protein -
  CDG62_RS18415 (CDG62_18420) def 3253328..3253858 (-) 531 WP_087528679.1 peptide deformylase -
  CDG62_RS18420 (CDG62_18425) tsaP 3253979..3255133 (+) 1155 WP_087528680.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  CDG62_RS18425 (CDG62_18430) dprA 3255156..3256289 (+) 1134 WP_087528681.1 DNA-processing protein DprA Machinery gene
  CDG62_RS18430 (CDG62_18435) - 3256335..3256904 (+) 570 WP_087528682.1 L-threonylcarbamoyladenylate synthase -
  CDG62_RS18435 (CDG62_18440) - 3257304..3258224 (-) 921 WP_087528683.1 DMT family transporter -
  CDG62_RS18440 (CDG62_18445) - 3258563..3259117 (+) 555 WP_087528684.1 hypothetical protein -
  CDG62_RS18445 (CDG62_18450) - 3259241..3259786 (+) 546 WP_087528685.1 glutathione peroxidase -
  CDG62_RS18450 (CDG62_18455) - 3259984..3260373 (+) 390 WP_087528686.1 RcnB family protein -
  CDG62_RS18455 (CDG62_18460) - 3260507..3261097 (+) 591 WP_087528687.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41577.17 Da        Isoelectric Point: 6.7178

>NTDB_id=314766 CDG62_RS18425 WP_087528681.1 3255156..3256289(+) (dprA) [Acinetobacter sp. WCHA55]
MLNSLSHEQIATITLWYLVQHSLSSFQKLQQHFGTSTKAVAASNLQIWSNLGLHKSHLQRAAEIQTPAGQIKLQTLLHDV
QASCDFILLDTESHYPSQLLPYSDRPPILFGQGNPQSLLQPQVAIVGSRKPSPHGKQVAYDFAFYLAEKGFYICSGLAEG
IDAAAHQGGLKHQRTIAVMGTGLDLTYPPQHQALRTKILENNGCIITEFLPHTPPLQHNFPRRNRIVSALSLGVVVAEAA
IKSGSLGTAKSAADQGKTIFAIPGHIYSEHHQGCHQLIREGAILVDHPEQIIEDLALPTQWHSQSQSQETIPSASFEIPS
DLLELYNQLDWVGQNMDQLNFKLNTDIATLTSQLMELEILGLAQQQAGNYLRCRSSQ

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=314766 CDG62_RS18425 WP_087528681.1 3255156..3256289(+) (dprA) [Acinetobacter sp. WCHA55]
ATGCTGAACTCTTTATCACATGAACAGATTGCAACAATCACCCTGTGGTATTTAGTTCAGCATTCTTTATCGAGCTTTCA
AAAACTACAGCAGCATTTTGGCACAAGCACAAAAGCCGTTGCTGCTTCCAATCTTCAGATCTGGTCAAATCTAGGCTTAC
ACAAAAGTCACCTACAACGTGCCGCAGAAATTCAAACACCTGCTGGCCAAATCAAATTACAAACTTTACTGCATGACGTC
CAAGCCAGTTGTGATTTTATTTTGCTTGATACAGAAAGTCATTATCCCTCGCAGCTGCTACCCTATTCTGACCGACCACC
CATTTTATTTGGTCAGGGCAATCCACAAAGTTTACTCCAACCTCAAGTTGCTATCGTCGGTAGTCGGAAACCCAGCCCGC
ACGGCAAACAAGTGGCTTATGACTTTGCTTTTTACCTCGCCGAAAAAGGCTTTTATATTTGCAGTGGTTTAGCTGAAGGT
ATTGATGCAGCAGCGCATCAGGGTGGCTTAAAACATCAGCGTACCATTGCGGTGATGGGCACAGGCTTAGATCTCACCTA
CCCGCCCCAACATCAAGCCCTGCGTACGAAAATATTGGAAAATAATGGCTGTATTATTACTGAATTTTTACCGCATACAC
CACCTTTACAACATAATTTTCCACGGCGGAACCGCATCGTCAGTGCATTGAGTTTAGGGGTTGTAGTTGCAGAGGCAGCA
ATCAAAAGTGGCTCTCTTGGCACAGCTAAATCTGCTGCTGATCAAGGCAAGACAATTTTTGCGATCCCTGGTCATATTTA
CAGTGAGCACCATCAAGGTTGTCATCAACTGATCCGAGAAGGGGCAATTTTGGTCGATCATCCTGAGCAAATCATTGAAG
ACTTGGCACTCCCCACCCAATGGCATAGCCAATCCCAGTCGCAAGAAACTATCCCAAGCGCGAGTTTTGAGATCCCATCT
GATTTACTCGAACTTTATAATCAACTGGATTGGGTCGGGCAAAATATGGATCAACTTAATTTCAAACTCAACACCGATAT
TGCCACACTTACCAGCCAATTAATGGAACTGGAGATTTTGGGCCTCGCACAACAACAGGCTGGCAATTATCTGCGTTGCC
GTTCCAGCCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A385NDT0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

65.691

99.735

0.655

  dprA Acinetobacter baumannii D1279779

64.894

99.735

0.647

  dprA Acinetobacter baylyi ADP1

60.367

100

0.61


Multiple sequence alignment