Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CDG62_RS03775 | Genome accession | NZ_CP032286 |
| Coordinates | 215443..216027 (+) | Length | 194 a.a. |
| NCBI ID | WP_087526717.1 | Uniprot ID | A0A385N3M9 |
| Organism | Acinetobacter sp. WCHA55 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 210443..221027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG62_RS03755 (CDG62_03760) | - | 211365..211739 (-) | 375 | WP_087526715.1 | hypothetical protein | - |
| CDG62_RS03760 (CDG62_03765) | tenA | 211902..212576 (-) | 675 | WP_087526716.1 | thiaminase II | - |
| CDG62_RS03765 (CDG62_03770) | - | 212788..213867 (+) | 1080 | WP_058870674.1 | DUF475 domain-containing protein | - |
| CDG62_RS03770 (CDG62_03775) | - | 214027..215391 (+) | 1365 | WP_087011846.1 | MFS transporter | - |
| CDG62_RS03775 (CDG62_03780) | ssb | 215443..216027 (+) | 585 | WP_087526717.1 | single-stranded DNA-binding protein | Machinery gene |
| CDG62_RS03780 (CDG62_03785) | - | 216236..217654 (-) | 1419 | WP_087526718.1 | aspartate ammonia-lyase | - |
| CDG62_RS03785 (CDG62_03790) | - | 217789..218679 (+) | 891 | WP_087526719.1 | LysR substrate-binding domain-containing protein | - |
| CDG62_RS03790 (CDG62_03795) | - | 218814..220112 (-) | 1299 | WP_087526720.1 | dicarboxylate/amino acid:cation symporter | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21330.06 Da Isoelectric Point: 6.4819
>NTDB_id=314728 CDG62_RS03775 WP_087526717.1 215443..216027(+) (ssb) [Acinetobacter sp. WCHA55]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEQMQGGNDGYAQPRFNNNQGGGYNNNNNQGGYGGNPATGNSNNQQ
GGYANNNPSGFAPKAAPQSAPATAPADMDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEQMQGGNDGYAQPRFNNNQGGGYNNNNNQGGYGGNPATGNSNNQQ
GGYANNNPSGFAPKAAPQSAPATAPADMDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=314728 CDG62_RS03775 WP_087526717.1 215443..216027(+) (ssb) [Acinetobacter sp. WCHA55]
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTGGGCCGAGATCCAGAGACGAAAACTTTTCCAAATGGTGGTTC
GTTGACACAGTTTTCAATTGCAACGAGCGACTCTTGGACAGATAAAAGTACAGGTGAGCGTAAAGAGCAAACTGAATGGC
ATCGTATTGTGTTACACAACCGTCTAGGTGAAATTGCGCAACAATACCTACGTAAAGGTTCGAAAGTTTATATTGAAGGT
TCACTGCGTACACGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACCACAGAAATTCGTGGTGAGCAAATGCAGAT
GCTTGACAACAACCGTCAGCAAGGTGAGCAAATGCAAGGCGGAAATGATGGTTATGCACAACCACGTTTCAACAATAACC
AAGGTGGTGGTTATAATAATAACAACAACCAAGGCGGTTATGGCGGCAATCCAGCAACGGGCAATAGCAACAACCAACAA
GGTGGTTATGCGAACAATAACCCAAGTGGTTTTGCACCAAAAGCAGCACCTCAGTCTGCGCCTGCAACAGCACCAGCAGA
TATGGATGATGATCTTCCATTCTAA
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTGGGCCGAGATCCAGAGACGAAAACTTTTCCAAATGGTGGTTC
GTTGACACAGTTTTCAATTGCAACGAGCGACTCTTGGACAGATAAAAGTACAGGTGAGCGTAAAGAGCAAACTGAATGGC
ATCGTATTGTGTTACACAACCGTCTAGGTGAAATTGCGCAACAATACCTACGTAAAGGTTCGAAAGTTTATATTGAAGGT
TCACTGCGTACACGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACCACAGAAATTCGTGGTGAGCAAATGCAGAT
GCTTGACAACAACCGTCAGCAAGGTGAGCAAATGCAAGGCGGAAATGATGGTTATGCACAACCACGTTTCAACAATAACC
AAGGTGGTGGTTATAATAATAACAACAACCAAGGCGGTTATGGCGGCAATCCAGCAACGGGCAATAGCAACAACCAACAA
GGTGGTTATGCGAACAATAACCCAAGTGGTTTTGCACCAAAAGCAGCACCTCAGTCTGCGCCTGCAACAGCACCAGCAGA
TATGGATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52 |
100 |
0.536 |
| ssb | Vibrio cholerae strain A1552 |
44.221 |
100 |
0.454 |
| ssb | Neisseria meningitidis MC58 |
39.5 |
100 |
0.407 |
| ssb | Neisseria gonorrhoeae MS11 |
39.5 |
100 |
0.407 |