Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SEZ_RS01850 | Genome accession | NC_011134 |
| Coordinates | 363738..364226 (+) | Length | 162 a.a. |
| NCBI ID | WP_012514998.1 | Uniprot ID | A0AAW3GP39 |
| Organism | Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 358738..369226
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEZ_RS01820 (Sez_0338) | - | 359128..360108 (-) | 981 | WP_012514993.1 | LPXTG cell wall anchor domain-containing protein | - |
| SEZ_RS01825 | - | 360328..360612 (-) | 285 | WP_041785270.1 | hypothetical protein | - |
| SEZ_RS01830 (Sez_0339) | mutY | 360903..362051 (-) | 1149 | WP_012514994.1 | A/G-specific adenine glycosylase | - |
| SEZ_RS01835 (Sez_0340) | - | 362167..362365 (+) | 199 | Protein_330 | HicB family protein | - |
| SEZ_RS01845 (Sez_0342) | rpsF | 363429..363719 (+) | 291 | WP_012514997.1 | 30S ribosomal protein S6 | - |
| SEZ_RS01850 (Sez_0343) | ssbA | 363738..364226 (+) | 489 | WP_012514998.1 | single-stranded DNA-binding protein | Machinery gene |
| SEZ_RS01855 (Sez_0344) | rpsR | 364385..364624 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| SEZ_RS01865 (Sez_0346) | - | 364825..366167 (+) | 1343 | WP_165626751.1 | IS3 family transposase | - |
| SEZ_RS01870 (Sez_0347) | - | 366317..366967 (-) | 651 | WP_012514999.1 | DUF1129 domain-containing protein | - |
| SEZ_RS01875 (Sez_0348) | - | 367144..368088 (-) | 945 | WP_012515000.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 162 a.a. Molecular weight: 17765.60 Da Isoelectric Point: 4.9008
>NTDB_id=31360 SEZ_RS01850 WP_012514998.1 363738..364226(+) (ssbA) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGGFNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDL
PF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGGFNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDL
PF
Nucleotide
Download Length: 489 bp
>NTDB_id=31360 SEZ_RS01850 WP_012514998.1 363738..364226(+) (ssbA) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAATTGTGTGATCT
GGCGGCAGCAGGCTGAAAATTTAGCTAACTGGGCCAAAAAGGGTGCCTTGATTGGGATTACAGGACGTATTCAGACCCGT
AACTACGAAAACCAACAGGGGCAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAGCTCGTCTGGCTCATATGGTGGTGGCTTTAATGGCTCACCGGCAGCCAATAGCTATTCAGCGCCTA
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAATTGTGTGATCT
GGCGGCAGCAGGCTGAAAATTTAGCTAACTGGGCCAAAAAGGGTGCCTTGATTGGGATTACAGGACGTATTCAGACCCGT
AACTACGAAAACCAACAGGGGCAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAGCTCGTCTGGCTCATATGGTGGTGGCTTTAATGGCTCACCGGCAGCCAATAGCTATTCAGCGCCTA
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.322 |
100 |
0.605 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.31 |
100 |
0.605 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.464 |
69.136 |
0.377 |
| ssb | Glaesserella parasuis strain SC1401 |
32.065 |
100 |
0.364 |