Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | Ahae2126ch_RS01700 | Genome accession | NZ_CP031991 |
| Coordinates | 367302..367799 (+) | Length | 165 a.a. |
| NCBI ID | WP_004641267.1 | Uniprot ID | N9FBJ9 |
| Organism | Acinetobacter haemolyticus strain 2126ch | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 362302..372799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ahae2126ch_RS01690 (Ahae2126ch_01710) | - | 362477..363265 (+) | 789 | WP_005086993.1 | hypothetical protein | - |
| Ahae2126ch_RS01695 (Ahae2126ch_01715) | - | 363282..367292 (+) | 4011 | WP_008941158.1 | pilus assembly protein | - |
| Ahae2126ch_RS01700 (Ahae2126ch_01720) | comE | 367302..367799 (+) | 498 | WP_004641267.1 | type IV pilin protein | Machinery gene |
| Ahae2126ch_RS01705 (Ahae2126ch_01725) | - | 367793..368251 (+) | 459 | WP_004641266.1 | type IV pilin protein | - |
| Ahae2126ch_RS01710 (Ahae2126ch_01730) | - | 368526..369122 (+) | 597 | WP_115736348.1 | Tfp pilus assembly protein FimT/FimU | - |
| Ahae2126ch_RS01715 (Ahae2126ch_01735) | pilV | 369119..369607 (+) | 489 | WP_004641261.1 | type IV pilus modification protein PilV | Machinery gene |
| Ahae2126ch_RS01720 (Ahae2126ch_01740) | comB | 369792..370739 (+) | 948 | WP_008941160.1 | PilW family protein | Machinery gene |
| Ahae2126ch_RS01725 (Ahae2126ch_01745) | pilX | 370742..371476 (+) | 735 | WP_004641259.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| Ahae2126ch_RS01730 (Ahae2126ch_01750) | - | 371619..372784 (+) | 1166 | WP_125316763.1 | IS3 family transposase | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 17952.36 Da Isoelectric Point: 8.4798
>NTDB_id=313200 Ahae2126ch_RS01700 WP_004641267.1 367302..367799(+) (comE) [Acinetobacter haemolyticus strain 2126ch]
MQNNRLTSAQGFTLVELMIVVVIVAIFAAIAIPSYQEYVRRAIAAQAQQEMQRISTELERSKARNFNYLGFPSTVVLPVG
ATGAAIQYTITVSDGADVSRSLTDSAATGQSWVMRGIWKTAETTNVDNFSFLMTSSGVRCKNKTKANITATNVDNATCGT
GREEW
MQNNRLTSAQGFTLVELMIVVVIVAIFAAIAIPSYQEYVRRAIAAQAQQEMQRISTELERSKARNFNYLGFPSTVVLPVG
ATGAAIQYTITVSDGADVSRSLTDSAATGQSWVMRGIWKTAETTNVDNFSFLMTSSGVRCKNKTKANITATNVDNATCGT
GREEW
Nucleotide
Download Length: 498 bp
>NTDB_id=313200 Ahae2126ch_RS01700 WP_004641267.1 367302..367799(+) (comE) [Acinetobacter haemolyticus strain 2126ch]
ATGCAAAATAATCGGTTAACCTCTGCTCAAGGGTTTACTTTGGTTGAACTAATGATTGTTGTCGTTATTGTTGCAATTTT
TGCAGCAATAGCGATACCAAGTTATCAAGAATATGTTCGGCGTGCGATTGCTGCGCAAGCTCAGCAGGAAATGCAACGCA
TATCAACTGAACTGGAAAGAAGTAAAGCTAGAAACTTCAATTATTTGGGGTTTCCGAGTACGGTTGTTTTGCCCGTTGGT
GCAACAGGTGCTGCGATTCAATATACGATTACTGTTAGTGACGGAGCAGATGTGAGTAGATCACTAACAGATAGTGCAGC
AACAGGACAAAGCTGGGTCATGCGCGGTATTTGGAAAACAGCCGAAACAACAAATGTGGATAACTTTAGTTTTTTGATGA
CCAGTTCAGGAGTCCGCTGTAAAAATAAAACCAAGGCAAACATTACAGCAACGAATGTCGATAATGCGACATGTGGTACA
GGGCGAGAAGAATGGTAA
ATGCAAAATAATCGGTTAACCTCTGCTCAAGGGTTTACTTTGGTTGAACTAATGATTGTTGTCGTTATTGTTGCAATTTT
TGCAGCAATAGCGATACCAAGTTATCAAGAATATGTTCGGCGTGCGATTGCTGCGCAAGCTCAGCAGGAAATGCAACGCA
TATCAACTGAACTGGAAAGAAGTAAAGCTAGAAACTTCAATTATTTGGGGTTTCCGAGTACGGTTGTTTTGCCCGTTGGT
GCAACAGGTGCTGCGATTCAATATACGATTACTGTTAGTGACGGAGCAGATGTGAGTAGATCACTAACAGATAGTGCAGC
AACAGGACAAAGCTGGGTCATGCGCGGTATTTGGAAAACAGCCGAAACAACAAATGTGGATAACTTTAGTTTTTTGATGA
CCAGTTCAGGAGTCCGCTGTAAAAATAAAACCAAGGCAAACATTACAGCAACGAATGTCGATAATGCGACATGTGGTACA
GGGCGAGAAGAATGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
43.243 |
100 |
0.485 |
| pilY2 | Acinetobacter baumannii D1279779 |
45.455 |
100 |
0.455 |