Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilP   Type   Machinery gene
Locus tag   AhaeAN3_RS01365 Genome accession   NZ_CP031984
Coordinates   289991..290518 (+) Length   175 a.a.
NCBI ID   WP_004641321.1    Uniprot ID   N9FCC9
Organism   Acinetobacter haemolyticus strain AN3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 284991..295518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN3_RS01350 (AhaeAN3_01380) comM 287582..288640 (+) 1059 WP_004641327.1 pilus assembly protein PilM Machinery gene
  AhaeAN3_RS01355 (AhaeAN3_01385) pilN 288640..289284 (+) 645 WP_004641325.1 PilN domain-containing protein Machinery gene
  AhaeAN3_RS01360 (AhaeAN3_01390) pilO 289281..289991 (+) 711 WP_160126829.1 type 4a pilus biogenesis protein PilO Machinery gene
  AhaeAN3_RS01365 (AhaeAN3_01395) pilP 289991..290518 (+) 528 WP_004641321.1 pilus assembly protein PilP Machinery gene
  AhaeAN3_RS01370 (AhaeAN3_01400) pilQ 290580..292712 (+) 2133 WP_171057143.1 type IV pilus secretin PilQ family protein Machinery gene
  AhaeAN3_RS01375 (AhaeAN3_01405) aroK 292751..293293 (+) 543 WP_005087029.1 shikimate kinase AroK -
  AhaeAN3_RS01380 (AhaeAN3_01410) aroB 293314..294399 (+) 1086 WP_004641316.1 3-dehydroquinate synthase -
  AhaeAN3_RS01385 (AhaeAN3_01415) - 294415..295287 (+) 873 WP_115736340.1 hypothetical protein -

Sequence


Protein


Download         Length: 175 a.a.        Molecular weight: 19371.61 Da        Isoelectric Point: 9.3444

>NTDB_id=313115 AhaeAN3_RS01365 WP_004641321.1 289991..290518(+) (pilP) [Acinetobacter haemolyticus strain AN3]
MNNYKLLLTLFVGLGMVGCDSRIDAVNQKMAEIRNQPPLPIEPAPIFTPVPLFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFNRQPQPLESYALESLNMKGSMRGRANETIALIQTPDGQIERVQVGSYLGMNQGRIIKISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=313115 AhaeAN3_RS01365 WP_004641321.1 289991..290518(+) (pilP) [Acinetobacter haemolyticus strain AN3]
ATGAATAATTATAAATTATTACTTACATTATTCGTTGGTCTTGGGATGGTGGGGTGTGACTCTCGCATTGATGCGGTGAA
TCAAAAAATGGCTGAAATTCGTAATCAGCCACCGTTACCGATTGAACCTGCGCCTATTTTTACGCCAGTTCCTCTATTTA
ATTACGCAGCACACCAACTGAAAAGTCCATTTATGCCAAGTTCGTTGGCGGCTGAATTAAAAATTATGGCAGGTAAACGT
GTTTATCCTAATTTTAATCGCCAGCCTCAGCCTTTAGAAAGCTATGCCTTAGAGTCTTTGAATATGAAAGGCAGTATGCG
TGGCCGTGCTAATGAAACCATTGCACTGATTCAAACACCAGATGGGCAGATTGAACGGGTGCAAGTGGGAAGCTATCTGG
GGATGAATCAGGGGCGGATTATTAAAATTAGTCCAACACAAATCGATTTGGTTGAAATCGTTCCTGATGGGCGAGAGGGT
TATGTTGAGAGACCAAGAACACTCGTTTTAATTGGACCTGCGCCGTAA

Domains


Predicted by InterproScan.

(27-170)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9FCC9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

81.714

100

0.817

  comL Acinetobacter baylyi ADP1

72

100

0.72


Multiple sequence alignment