Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilN   Type   Machinery gene
Locus tag   AhaeAN3_RS01355 Genome accession   NZ_CP031984
Coordinates   288640..289284 (+) Length   214 a.a.
NCBI ID   WP_004641325.1    Uniprot ID   N9GL44
Organism   Acinetobacter haemolyticus strain AN3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 283640..294284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN3_RS01340 (AhaeAN3_01370) - 283980..284798 (+) 819 WP_125502219.1 putative RNA methyltransferase -
  AhaeAN3_RS01345 (AhaeAN3_01375) ponA 284827..287418 (-) 2592 WP_026070395.1 penicillin-binding protein PBP1a -
  AhaeAN3_RS01350 (AhaeAN3_01380) comM 287582..288640 (+) 1059 WP_004641327.1 pilus assembly protein PilM Machinery gene
  AhaeAN3_RS01355 (AhaeAN3_01385) pilN 288640..289284 (+) 645 WP_004641325.1 PilN domain-containing protein Machinery gene
  AhaeAN3_RS01360 (AhaeAN3_01390) pilO 289281..289991 (+) 711 WP_160126829.1 type 4a pilus biogenesis protein PilO Machinery gene
  AhaeAN3_RS01365 (AhaeAN3_01395) pilP 289991..290518 (+) 528 WP_004641321.1 pilus assembly protein PilP Machinery gene
  AhaeAN3_RS01370 (AhaeAN3_01400) pilQ 290580..292712 (+) 2133 WP_171057143.1 type IV pilus secretin PilQ family protein Machinery gene
  AhaeAN3_RS01375 (AhaeAN3_01405) aroK 292751..293293 (+) 543 WP_005087029.1 shikimate kinase AroK -

Sequence


Protein


Download         Length: 214 a.a.        Molecular weight: 23956.37 Da        Isoelectric Point: 6.0102

>NTDB_id=313113 AhaeAN3_RS01355 WP_004641325.1 288640..289284(+) (pilN) [Acinetobacter haemolyticus strain AN3]
MAKINLLPWRDELREQRKKQFIAFCVGVAALGIASVFTAWMYFDHKLNDQEQANQFIVSTNQNLDVQLKSLEGLQERRNA
IIERMKLIQGLQGQRPVIVRLVDELVRVTPPTMYITKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
SEEKKDKAVSSLVPRVEENYGSFVVTVDLGEIGTTVTTDPASESAASVTVGGAQ

Nucleotide


Download         Length: 645 bp        

>NTDB_id=313113 AhaeAN3_RS01355 WP_004641325.1 288640..289284(+) (pilN) [Acinetobacter haemolyticus strain AN3]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAAAGAAAGAAACAATTTATTGCATTTTGTGTTGG
GGTGGCTGCTTTAGGAATCGCATCTGTATTTACAGCATGGATGTATTTTGATCACAAGCTGAATGATCAAGAACAAGCAA
ACCAGTTTATTGTGAGTACCAATCAAAACTTAGATGTTCAACTGAAGTCATTAGAGGGATTGCAAGAGCGTCGCAATGCG
ATTATTGAACGCATGAAGTTGATTCAAGGACTGCAAGGACAACGACCAGTCATTGTACGTTTGGTTGATGAGTTGGTGCG
TGTAACCCCTCCAACAATGTACATCACTAAGTTTACGCGTACAGGTGATAAATTTACCATCGAAGGAAAAGCAGAGAGTC
CAAATACCGTTGCCGAGCTGTTACGAAATTTGGAAGCTTCACCTTGGTATCGTAACGCATTTATGAATTCGTTTTTGGCA
TCAGAAGAGAAAAAAGATAAAGCCGTTAGCTCTTTAGTTCCTCGTGTCGAAGAAAATTATGGCAGTTTCGTTGTTACTGT
AGACTTGGGTGAAATTGGAACCACGGTGACAACTGATCCTGCTTCAGAATCAGCTGCATCAGTAACAGTGGGAGGCGCAC
AATGA

Domains


Predicted by InterproScan.

(100-167)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9GL44

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

78.972

100

0.79

  comN Acinetobacter baylyi ADP1

71.905

98.131

0.706


Multiple sequence alignment