Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AhaeAN43_RS01130 | Genome accession | NZ_CP031976 |
| Coordinates | 251785..252363 (+) | Length | 192 a.a. |
| NCBI ID | WP_100833074.1 | Uniprot ID | - |
| Organism | Acinetobacter haemolyticus strain AN43 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 246785..257363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AhaeAN43_RS01105 (AhaeAN43_01120) | - | 247175..247747 (+) | 573 | WP_160126423.1 | DUF2939 domain-containing protein | - |
| AhaeAN43_RS01110 (AhaeAN43_01125) | - | 247803..248156 (+) | 354 | WP_004641483.1 | DUF1304 domain-containing protein | - |
| AhaeAN43_RS01115 (AhaeAN43_01130) | tenA | 248308..248982 (-) | 675 | WP_160126424.1 | thiaminase II | - |
| AhaeAN43_RS01120 (AhaeAN43_01135) | - | 249155..250237 (+) | 1083 | WP_004641480.1 | DUF475 domain-containing protein | - |
| AhaeAN43_RS01125 (AhaeAN43_01140) | - | 250369..251733 (+) | 1365 | WP_109440013.1 | MFS transporter | - |
| AhaeAN43_RS01130 (AhaeAN43_01145) | ssb | 251785..252363 (+) | 579 | WP_100833074.1 | single-stranded DNA-binding protein | Machinery gene |
| AhaeAN43_RS01135 (AhaeAN43_01155) | - | 252766..254199 (+) | 1434 | WP_017396719.1 | amino acid permease | - |
| AhaeAN43_RS01140 (AhaeAN43_01160) | - | 254258..255760 (-) | 1503 | WP_100833076.1 | PLP-dependent aminotransferase family protein | - |
| AhaeAN43_RS01145 (AhaeAN43_01165) | gabT | 255915..257207 (+) | 1293 | WP_160126425.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 21083.76 Da Isoelectric Point: 6.7311
>NTDB_id=313031 AhaeAN43_RS01130 WP_100833074.1 251785..252363(+) (ssb) [Acinetobacter haemolyticus strain AN43]
MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQSEQSGGDFNQPRFNNNQGGGYQNTGHNNNQNGYGQGGGFNGGNQGNY
AGSPQAGNGFNSPKAPQPAATAPADLDDDLPF
MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQSEQSGGDFNQPRFNNNQGGGYQNTGHNNNQNGYGQGGGFNGGNQGNY
AGSPQAGNGFNSPKAPQPAATAPADLDDDLPF
Nucleotide
Download Length: 579 bp
>NTDB_id=313031 AhaeAN43_RS01130 WP_100833074.1 251785..252363(+) (ssb) [Acinetobacter haemolyticus strain AN43]
ATGCGTGGTGTGAATAAAGTTATTTTAGTTGGTACTTTGGGTAAAGATCCAGAAACAAAGACCTTTCCGAATGGTGGCTC
GCTAACACAGTTCTCGATTGCAACAAGTGAATCTTGGACAGATAAAAATACAGGCGAACGTAAAGAACAAACGGAATGGC
ATCGTATTGTATTGCATAACCGTTTAGGTGAAATTGCACAGCAATATCTTCGCAAAGGTTCGAAGGTTTATATCGAAGGT
TCGCTACGTACTCGTCAGTGGACTGACCAAAATGGTCAAGAGCGCTACAGCACTGAAATTCGCGGTGATCAAATGCAAAT
GCTTGATTCACGTCAGCAGAGCGAACAAAGCGGTGGTGATTTCAATCAACCACGTTTTAACAATAATCAAGGCGGTGGAT
ACCAAAACACAGGTCATAACAACAATCAAAATGGTTATGGTCAAGGTGGTGGTTTTAATGGTGGAAACCAAGGCAATTAT
GCTGGCAGCCCACAAGCTGGAAATGGCTTTAACTCGCCTAAAGCACCACAGCCTGCTGCAACAGCACCTGCGGATTTAGA
TGATGATTTGCCGTTCTAA
ATGCGTGGTGTGAATAAAGTTATTTTAGTTGGTACTTTGGGTAAAGATCCAGAAACAAAGACCTTTCCGAATGGTGGCTC
GCTAACACAGTTCTCGATTGCAACAAGTGAATCTTGGACAGATAAAAATACAGGCGAACGTAAAGAACAAACGGAATGGC
ATCGTATTGTATTGCATAACCGTTTAGGTGAAATTGCACAGCAATATCTTCGCAAAGGTTCGAAGGTTTATATCGAAGGT
TCGCTACGTACTCGTCAGTGGACTGACCAAAATGGTCAAGAGCGCTACAGCACTGAAATTCGCGGTGATCAAATGCAAAT
GCTTGATTCACGTCAGCAGAGCGAACAAAGCGGTGGTGATTTCAATCAACCACGTTTTAACAATAATCAAGGCGGTGGAT
ACCAAAACACAGGTCATAACAACAATCAAAATGGTTATGGTCAAGGTGGTGGTTTTAATGGTGGAAACCAAGGCAATTAT
GCTGGCAGCCCACAAGCTGGAAATGGCTTTAACTCGCCTAAAGCACCACAGCCTGCTGCAACAGCACCTGCGGATTTAGA
TGATGATTTGCCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
53.731 |
100 |
0.562 |
| ssb | Vibrio cholerae strain A1552 |
45.178 |
100 |
0.464 |
| ssb | Neisseria meningitidis MC58 |
38.342 |
100 |
0.385 |
| ssb | Neisseria gonorrhoeae MS11 |
38.342 |
100 |
0.385 |