Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | D0819_RS08280 | Genome accession | NZ_CP031784 |
| Coordinates | 1585570..1585905 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain HMNig-2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1580570..1590905
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0819_RS08260 (D0819_08270) | gcvT | 1581161..1582249 (-) | 1089 | WP_021480013.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| D0819_RS08265 (D0819_08275) | hepAA | 1582691..1584364 (+) | 1674 | WP_021480014.1 | SNF2-related protein | - |
| D0819_RS08270 (D0819_08280) | yqhG | 1584385..1585179 (+) | 795 | WP_021480015.1 | YqhG family protein | - |
| D0819_RS08275 (D0819_08290) | sinI | 1585363..1585536 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| D0819_RS08280 (D0819_08295) | sinR | 1585570..1585905 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| D0819_RS08285 (D0819_08300) | tasA | 1585998..1586783 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| D0819_RS08290 (D0819_08305) | sipW | 1586848..1587420 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| D0819_RS08295 (D0819_08310) | tapA | 1587404..1588165 (-) | 762 | WP_077671431.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D0819_RS08300 (D0819_08315) | yqzG | 1588436..1588762 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| D0819_RS08305 (D0819_08320) | spoIITA | 1588804..1588983 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| D0819_RS08310 (D0819_08325) | comGG | 1589055..1589429 (-) | 375 | WP_021480019.1 | ComG operon protein ComGG | Machinery gene |
| D0819_RS08315 (D0819_08330) | comGF | 1589430..1589813 (-) | 384 | WP_031315212.1 | ComG operon protein ComGF | Machinery gene |
| D0819_RS08320 (D0819_08335) | comGE | 1589839..1590186 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| D0819_RS08325 (D0819_08340) | comGD | 1590170..1590601 (-) | 432 | WP_021480021.1 | comG operon protein ComGD | Machinery gene |
| D0819_RS08330 (D0819_08345) | comGC | 1590591..1590887 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=311372 D0819_RS08280 WP_003226345.1 1585570..1585905(+) (sinR) [Bacillus subtilis strain HMNig-2]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=311372 D0819_RS08280 WP_003226345.1 1585570..1585905(+) (sinR) [Bacillus subtilis strain HMNig-2]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |