Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   D0808_RS14740 Genome accession   NZ_CP031783
Coordinates   2897953..2898126 (+) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis strain MENO2 voucher National Research Centre     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 2892953..2903126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0808_RS14725 (D0808_14840) gcvT 2893752..2894840 (-) 1089 WP_086344077.1 glycine cleavage system aminomethyltransferase GcvT -
  D0808_RS14730 (D0808_14845) hepAA 2895282..2896955 (+) 1674 WP_047182869.1 SNF2-related protein -
  D0808_RS14735 (D0808_14850) yqhG 2896976..2897770 (+) 795 WP_003230200.1 YqhG family protein -
  D0808_RS14740 (D0808_14855) sinI 2897953..2898126 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  D0808_RS14745 (D0808_14860) sinR 2898160..2898495 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  D0808_RS14750 (D0808_14865) tasA 2898588..2899373 (-) 786 WP_153256196.1 biofilm matrix protein TasA -
  D0808_RS14755 (D0808_14870) sipW 2899437..2900009 (-) 573 WP_003246088.1 signal peptidase I SipW -
  D0808_RS14760 (D0808_14875) tapA 2899993..2900754 (-) 762 WP_129092525.1 amyloid fiber anchoring/assembly protein TapA -
  D0808_RS14765 (D0808_14880) yqzG 2901027..2901353 (+) 327 WP_024573388.1 YqzG/YhdC family protein -
  D0808_RS14770 (D0808_14885) spoIITA 2901395..2901574 (-) 180 WP_014480252.1 YqzE family protein -
  D0808_RS14775 (D0808_14890) comGG 2901646..2902020 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  D0808_RS14780 (D0808_14895) comGF 2902021..2902404 (-) 384 WP_130572559.1 ComG operon protein ComGF Machinery gene
  D0808_RS14785 (D0808_14900) comGE 2902430..2902777 (-) 348 WP_153256197.1 ComG operon protein 5 Machinery gene

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=311311 D0808_RS14740 WP_003230187.1 2897953..2898126(+) (sinI) [Bacillus subtilis strain MENO2 voucher National Research Centre]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=311311 D0808_RS14740 WP_003230187.1 2897953..2898126(+) (sinI) [Bacillus subtilis strain MENO2 voucher National Research Centre]
ATGAAAAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment