Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DDV21_RS08250 Genome accession   NZ_CP031733
Coordinates   1733123..1733932 (-) Length   269 a.a.
NCBI ID   WP_116879123.1    Uniprot ID   A0A372KIW5
Organism   Streptococcus chenjunshii strain Z15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1728123..1738932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV21_RS08240 (DDV21_008240) smc 1728266..1731805 (-) 3540 WP_116878191.1 chromosome segregation protein SMC -
  DDV21_RS08245 (DDV21_008245) rnc 1731813..1732499 (-) 687 WP_116878190.1 ribonuclease III -
  DDV21_RS08250 (DDV21_008250) vicX 1733123..1733932 (-) 810 WP_116879123.1 MBL fold metallo-hydrolase Regulator
  DDV21_RS08255 (DDV21_008255) vicK 1733935..1735293 (-) 1359 WP_116879124.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DDV21_RS08260 (DDV21_008260) vicR 1735286..1735996 (-) 711 WP_116879125.1 response regulator YycF Regulator
  DDV21_RS08265 (DDV21_008265) - 1736377..1737141 (+) 765 WP_116879126.1 amino acid ABC transporter ATP-binding protein -
  DDV21_RS08270 (DDV21_008270) - 1737152..1737973 (+) 822 WP_116879127.1 transporter substrate-binding domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30113.02 Da        Isoelectric Point: 6.3674

>NTDB_id=310844 DDV21_RS08250 WP_116879123.1 1733123..1733932(-) (vicX) [Streptococcus chenjunshii strain Z15]
MSESGFKYSVLASGSSGNSFYLETDQKKILVDAGLTGKKITSLLAEINRKPEDLDAILITHEHSDHIKGVGVLARKYHLD
LYANEKTWQVIDEHHMIGSVSQEQKHIFKRGSMMTFGDLDIESFGVSHDAAEPQFYRFMKDNKSFVMLTDTGYVSDRLAG
LIENADAYLIESNHDIEILRSGSYPWRLKQRILSDRGHLSNDDGAQAMIRSIGNRTRKIYLGHLSKENNIKELAHMTMET
SLLAADLGAGTDFKVFDTSPDTATPLTKI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=310844 DDV21_RS08250 WP_116879123.1 1733123..1733932(-) (vicX) [Streptococcus chenjunshii strain Z15]
ATGTCAGAAAGCGGATTTAAGTACAGTGTTTTAGCATCAGGTTCCAGCGGTAACAGTTTTTATCTTGAAACTGACCAAAA
AAAGATCTTGGTTGATGCTGGCCTGACTGGTAAGAAGATTACCAGTCTTTTAGCTGAAATCAACCGCAAACCGGAAGATC
TTGATGCTATTTTAATTACACATGAGCACTCAGATCATATAAAAGGAGTCGGTGTTTTAGCGCGTAAATATCATTTGGAC
CTCTACGCCAATGAAAAAACGTGGCAGGTAATAGACGAACATCATATGATTGGTTCGGTCAGCCAAGAACAAAAGCATAT
TTTTAAACGCGGCAGCATGATGACTTTTGGCGACCTTGACATTGAAAGTTTCGGTGTCAGTCATGATGCAGCCGAGCCGC
AGTTTTATCGGTTTATGAAAGATAATAAAAGTTTTGTCATGCTGACAGATACCGGGTATGTCAGTGACCGTTTAGCAGGC
TTGATTGAAAACGCAGATGCTTACTTGATTGAATCGAATCATGATATTGAGATTCTTCGGTCCGGTTCGTATCCTTGGCG
GCTCAAGCAGCGTATTCTGTCGGACAGAGGCCATCTGTCCAATGATGACGGTGCGCAGGCTATGATTCGGTCAATCGGCA
ATCGGACACGAAAGATCTACTTAGGCCATCTTAGTAAAGAAAACAATATTAAAGAGCTTGCACATATGACGATGGAGACC
AGTCTTTTAGCCGCAGATTTAGGAGCTGGAACTGATTTTAAAGTTTTTGATACATCGCCTGATACAGCAACTCCTTTGAC
CAAAATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A372KIW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

74.349

100

0.743

Multiple sequence alignment