Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   DDV21_RS06900 Genome accession   NZ_CP031733
Coordinates   1423540..1425291 (-) Length   583 a.a.
NCBI ID   WP_116877664.1    Uniprot ID   A0A372KN50
Organism   Streptococcus chenjunshii strain Z15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1418540..1430291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV21_RS06870 (DDV21_006870) - 1419091..1419711 (-) 621 WP_116877659.1 GTP pyrophosphokinase family protein -
  DDV21_RS06875 (DDV21_006875) - 1419792..1420433 (-) 642 WP_116877660.1 ABC transporter permease -
  DDV21_RS06880 (DDV21_006880) - 1420426..1421199 (-) 774 WP_116877661.1 ABC transporter ATP-binding protein -
  DDV21_RS06885 (DDV21_006885) - 1421210..1422115 (-) 906 WP_116877662.1 glycine betaine ABC transporter substrate-binding protein -
  DDV21_RS06890 (DDV21_006890) - 1422105..1422740 (-) 636 WP_116877663.1 ABC transporter permease -
  DDV21_RS06895 (DDV21_006895) - 1422733..1423191 (-) 459 WP_241964655.1 MarR family transcriptional regulator -
  DDV21_RS06900 (DDV21_006900) rcrQ 1423540..1425291 (-) 1752 WP_116877664.1 ABC transporter ATP-binding protein Regulator
  DDV21_RS06905 (DDV21_006905) rcrP 1425281..1427083 (-) 1803 WP_116877665.1 ABC transporter ATP-binding protein Regulator
  DDV21_RS06910 (DDV21_006910) - 1427612..1428043 (-) 432 Protein_1308 MarR family transcriptional regulator -
  DDV21_RS06915 (DDV21_006915) gdhA 1428493..1429842 (-) 1350 WP_116877667.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64302.34 Da        Isoelectric Point: 5.4899

>NTDB_id=310840 DDV21_RS06900 WP_116877664.1 1423540..1425291(-) (rcrQ) [Streptococcus chenjunshii strain Z15]
MGNKRKVSLFSQMAPYIKSYRAAFLLAVVFTVISSSITVIGPDKLKEITDAITEGLAGQLDLDKIGRIAMTLALMYGAGA
VISYTASFIVTTIIQKFSQKMRNAIADKINVLPLRYFDSHPQGDTLSRVTNDVDLMTQSLNQSLVSLVAAVVLLFGSIFM
MIRTNGVLAATAIGSVFIGFILVIFIMSKTQPFFTRQQDNMAKVNGYVEEIYTGHNVVTSYSAVDQTKETFNQLNQNLYT
SMWKSQFFSGIMMPMMQFIGNFGYVMVCIVGATLAINGDITMGTIVAFMTYVRIFSQPLSQIAQAVTQLQSARAAMGRVF
EFLDEKEMSDEGAKERQLTAVKGDVAFKDVFFGYSKDKVIIHDFSAAAQAGQKIAIVGPTGAGKTTIVNLLMKFYDIDRG
SITIDGIDINQMKREEVHDAFAMVLQDTWLFEGTVKENLIYNQENITDDQVVAAAKSVGVHHFIMTLPQGYDTMLDDSVS
LSVGQKQLMTIARALLKDAPLLILDEATSSVDTRTEELIQQAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQG
NHDQLMSAGGFYADLYNSQFQAS

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=310840 DDV21_RS06900 WP_116877664.1 1423540..1425291(-) (rcrQ) [Streptococcus chenjunshii strain Z15]
ATGGGAAATAAAAGAAAAGTGTCTTTATTCAGCCAAATGGCTCCTTATATTAAAAGTTACCGCGCAGCTTTTTTGCTCGC
TGTTGTGTTTACGGTTATTTCAAGCAGCATCACTGTTATTGGTCCTGATAAGCTAAAAGAGATTACAGATGCTATCACTG
AAGGATTGGCCGGACAGCTTGATTTAGATAAAATTGGCAGGATTGCCATGACTTTGGCACTTATGTACGGAGCCGGTGCG
GTTATTTCTTATACAGCCAGCTTTATTGTCACAACTATTATCCAAAAATTTTCACAAAAGATGCGCAATGCCATCGCTGA
TAAGATTAATGTCTTGCCTTTGCGGTATTTTGACAGCCACCCTCAGGGAGACACTCTTTCTCGTGTGACCAACGATGTCG
ACTTGATGACGCAGTCACTCAATCAAAGCTTAGTCTCGCTTGTAGCTGCTGTTGTACTCTTATTCGGTTCAATTTTTATG
ATGATAAGAACTAACGGTGTTCTGGCAGCAACCGCTATCGGTTCTGTTTTTATCGGCTTTATTCTTGTTATTTTTATTAT
GAGTAAAACACAGCCCTTCTTTACCCGGCAGCAGGATAATATGGCTAAGGTTAATGGCTATGTTGAAGAAATTTATACCG
GCCACAATGTTGTGACAAGCTACAGTGCTGTTGATCAGACCAAAGAAACGTTTAATCAGCTTAATCAAAATTTATATACA
AGTATGTGGAAGTCACAATTCTTTTCAGGAATTATGATGCCTATGATGCAGTTTATCGGAAATTTTGGCTATGTCATGGT
TTGTATTGTCGGTGCTACTCTGGCTATCAATGGCGATATCACAATGGGGACAATTGTCGCCTTTATGACCTATGTCCGTA
TTTTCTCGCAGCCTTTATCACAGATTGCACAGGCAGTCACACAATTACAGTCAGCCCGTGCTGCAATGGGACGAGTTTTT
GAATTTCTGGATGAAAAAGAAATGAGTGATGAAGGGGCTAAAGAAAGACAGCTTACAGCGGTTAAAGGTGATGTTGCCTT
CAAGGATGTTTTCTTTGGCTATTCGAAGGACAAGGTGATTATTCATGATTTTTCCGCGGCTGCTCAGGCTGGACAGAAAA
TTGCTATTGTCGGCCCAACCGGTGCCGGTAAAACAACGATTGTCAATCTGCTGATGAAATTTTACGACATTGATCGCGGC
AGTATTACTATTGACGGAATTGATATCAATCAGATGAAACGTGAAGAAGTTCATGATGCTTTTGCGATGGTCCTGCAGGA
TACTTGGCTTTTTGAAGGCACGGTTAAAGAGAATTTAATCTATAATCAGGAAAATATTACAGATGATCAAGTTGTTGCAG
CTGCTAAATCTGTCGGTGTACACCATTTTATTATGACTCTGCCGCAAGGCTATGATACCATGCTCGATGATTCGGTCAGT
CTGTCGGTAGGTCAGAAGCAGCTGATGACTATAGCCCGTGCACTACTGAAAGATGCTCCTCTTCTTATTCTGGACGAAGC
GACCTCGTCAGTTGATACCAGAACGGAGGAACTGATTCAGCAAGCCATGGATAAACTGATGGAGGGACGGACATCATTCG
TTATTGCTCACAGGCTGTCTACTATCCGTAATGCTGATCTGATATTAGTTATGAAGGACGGCAATATTATTGAACAAGGC
AACCATGACCAGCTGATGTCAGCCGGCGGTTTCTATGCAGACCTCTATAACTCACAGTTCCAAGCTTCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(362-509)

ABC transporter transmembrane region (ABC_membrane)

(25-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A372KN50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

78.448

99.485

0.78

Multiple sequence alignment