Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SaO408_RS03685 Genome accession   NZ_CP038270
Coordinates   731313..731987 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain O408 isolate B115     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 726313..736987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO408_RS03660 (SaO408_0683) - 726529..727596 (+) 1068 WP_000980142.1 membrane protein -
  SaO408_RS03665 (SaO408_0684) - 727747..728790 (+) 1044 WP_001030765.1 alpha/beta hydrolase -
  SaO408_RS03670 (SaO408_0685) - 729120..729548 (+) 429 WP_000198501.1 hypothetical protein -
  SaO408_RS03675 (SaO408_0686) - 729755..730261 (-) 507 WP_000940131.1 GNAT family N-acetyltransferase -
  SaO408_RS03680 (SaO408_0687) graX 730374..731297 (+) 924 WP_000802959.1 auxiliary protein GraX/ApsX -
  SaO408_RS03685 (SaO408_0688) braR 731313..731987 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  SaO408_RS03690 (SaO408_0689) graS 731980..733020 (+) 1041 WP_001061261.1 histidine kinase GraS/ApsS -
  SaO408_RS03695 (SaO408_0690) vraF 733164..733925 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SaO408_RS03700 (SaO408_0691) vraG 733915..735804 (+) 1890 WP_000143629.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=310753 SaO408_RS03685 WP_001166496.1 731313..731987(+) (braR) [Staphylococcus aureus strain O408 isolate B115]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=310753 SaO408_RS03685 WP_001166496.1 731313..731987(+) (braR) [Staphylococcus aureus strain O408 isolate B115]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397

Multiple sequence alignment