Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   D0T90_RS02210 Genome accession   NZ_CP031699
Coordinates   508239..510278 (-) Length   679 a.a.
NCBI ID   WP_123794640.1    Uniprot ID   A0A5P3MRQ6
Organism   Neisseria animalis strain ATCC 49930     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 503239..515278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0T90_RS02195 (D0T90_02280) - 503767..504417 (-) 651 WP_123794638.1 GrxB family glutaredoxin -
  D0T90_RS02200 (D0T90_02285) - 504617..506821 (+) 2205 WP_123794639.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  D0T90_RS02205 (D0T90_02290) - 506892..507518 (-) 627 WP_123794730.1 hemolysin III family protein -
  D0T90_RS02210 (D0T90_02295) recG 508239..510278 (-) 2040 WP_123794640.1 ATP-dependent DNA helicase RecG Machinery gene
  D0T90_RS02215 (D0T90_02300) - 510451..511497 (+) 1047 WP_197717788.1 sulfate ABC transporter substrate-binding protein -
  D0T90_RS02220 (D0T90_02305) - 511957..512208 (+) 252 WP_123794641.1 DUF1289 domain-containing protein -

Sequence


Protein


Download         Length: 679 a.a.        Molecular weight: 75179.98 Da        Isoelectric Point: 7.7268

>NTDB_id=310504 D0T90_RS02210 WP_123794640.1 508239..510278(-) (recG) [Neisseria animalis strain ATCC 49930]
MLPVHQKQLKITDVSAKKLEKLNLHTPWDIVLHLPLRYEDETHIMPIADAPAGTPCQVEGEVLHQEVQFKPRKQLIVQIA
DGSGSVLHLRFIHFYPSHQKQMAVGKRIRAVGEIKRGFYGDEMIHPKIRDAENSGLAESLTPVYPTVNGLNQPTLRRIIQ
TALEVVPLHDTLPDGLLGRLKLPHLAESLRLLHAPPPSFTIYQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTAK
SLKESGELSGKLIRSLPFTLTAAQQRVLSEIRADLAQTHPMHRLLQGDVGSGKTIVAALSALTAIEAGCQVAVMAPTEIL
AEQHYIKFKQWFEPMGLAVAWLSGSQRKKEKEQNKAAVSDGLAPIAVGTHALFQDDVQFQNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIKTRLVNNARRAEVEGFVLNTCRKGQQAYWVCPLIE
ESEPLQLQTATETLEALQAALPELSVGLVHGRMKAAEKAGVMAEFSAGRLNVLVATTVIEVGVDVPNASLMVIEHAERMG
LAQLHQLRGRVGRGAAASHCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEED
LHLLEKARETAPQLIEQRPDIVEAHLERWLSSREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=310504 D0T90_RS02210 WP_123794640.1 508239..510278(-) (recG) [Neisseria animalis strain ATCC 49930]
ATGCTGCCCGTTCACCAAAAACAGCTCAAAATCACCGACGTTTCCGCCAAAAAGCTGGAAAAACTCAATCTGCACACGCC
GTGGGACATCGTGCTGCACCTGCCGCTGCGCTATGAAGACGAAACCCACATCATGCCGATTGCCGACGCACCCGCCGGCA
CGCCCTGCCAAGTGGAGGGCGAAGTGCTGCATCAGGAAGTGCAGTTCAAACCGCGCAAGCAGCTTATCGTACAGATTGCA
GACGGCTCGGGCAGTGTGCTGCACCTGCGTTTTATCCACTTCTACCCCAGCCATCAGAAACAGATGGCGGTGGGCAAACG
CATCCGCGCCGTGGGCGAAATCAAACGCGGTTTTTACGGCGACGAGATGATTCACCCGAAAATCCGCGATGCCGAAAACA
GCGGGCTGGCCGAAAGCCTCACGCCGGTGTATCCCACTGTAAACGGCCTCAACCAGCCCACCTTGCGCCGCATCATTCAG
ACGGCCTTGGAAGTGGTTCCGCTGCACGACACCCTGCCCGACGGATTATTAGGCCGTCTGAAACTGCCGCATCTGGCCGA
AAGCCTGCGCCTTTTGCACGCGCCGCCGCCCAGCTTTACCATCTACCAACTTTCAGACGGCACGCTCCCCGCATGGCAGC
GGCTCAAATTCGACGAACTTCTGGCGCAGCAATTATCCATGCGGCTGGCGCGGCAAAAACGCGTCAGTGGTACGGCTAAG
TCGTTGAAAGAAAGTGGAGAATTATCCGGTAAGCTCATTCGCAGCCTGCCATTTACCCTTACTGCCGCCCAGCAGCGCGT
CTTAAGCGAAATCCGCGCTGACCTCGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCAAAA
CCATTGTTGCCGCGCTCTCTGCGCTTACCGCCATCGAAGCCGGCTGCCAAGTCGCGGTGATGGCACCCACCGAAATCCTT
GCCGAGCAGCACTACATTAAGTTCAAACAATGGTTTGAGCCTATGGGCTTGGCCGTGGCATGGCTTTCCGGCAGCCAGCG
CAAAAAAGAAAAAGAGCAAAACAAAGCCGCCGTTTCAGACGGCCTCGCCCCGATTGCCGTCGGCACGCACGCGCTGTTTC
AAGACGACGTGCAGTTTCAAAATTTAGGCTTGGTGATTGTCGACGAGCAGCACCGTTTCGGTGTGGCGCAGCGTTTGGCC
TTGAAAAACAAAGGCCAAGACGTACACCAACTGATGATGTCGGCTACTCCTATCCCACGCACGCTGGCGATGAGCTTCTT
CGCCGACCTCGACGTTTCCGTGATTGACGAATTGCCGCCCAACCGCACCCCGATTAAAACACGGCTGGTCAACAACGCCC
GCCGCGCCGAAGTCGAAGGCTTCGTGTTGAACACCTGCCGCAAAGGACAGCAGGCCTATTGGGTCTGCCCCCTGATTGAA
GAGAGCGAACCCCTGCAACTGCAAACCGCCACCGAAACCCTCGAAGCCCTTCAAGCGGCCTTGCCCGAATTATCCGTCGG
CCTCGTGCACGGGCGCATGAAAGCCGCCGAAAAAGCCGGCGTGATGGCCGAATTTTCCGCAGGCCGTCTGAATGTTTTAG
TGGCCACCACCGTCATTGAAGTCGGTGTGGACGTGCCCAACGCCAGCCTGATGGTCATCGAACACGCCGAACGCATGGGC
TTGGCGCAACTGCACCAACTGCGCGGGCGCGTCGGGCGCGGAGCCGCCGCCAGCCATTGCGTGCTGCTGTTTGCCGAGCC
GTTAAGCGAACTGGCCAAAGCACGTCTGAAAGTGATTTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACCTCA
ATATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAAAGCGGCGTACCCATGCTGCGCTTCGCCAACCTCGAAGAAGAC
CTGCACCTCTTGGAAAAAGCCCGCGAAACCGCCCCGCAACTGATCGAACAGCGGCCGGATATTGTGGAGGCGCATTTGGA
GAGATGGTTGAGCAGTCGGGAAGGGTATTTGGGGGTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5P3MRQ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

85.125

100

0.851


Multiple sequence alignment