Detailed information NTG0310371

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: DXY21_RS02880
• Genome accession: NZ_CP031694
• Coordinates: 559355..560503 (-)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus velezensis strain SRCM101368
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 554355..565503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXY21_RS02850 (DXY21_00567)	-	554491..555249 (-)	759	WP_003156330.1	ABC transporter ATP-binding protein	-
DXY21_RS02855 (DXY21_00568)	-	555243..556190 (-)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
DXY21_RS02860 (DXY21_00569)	ceuB	556180..557133 (-)	954	WP_046559346.1	ABC transporter permease	Machinery gene
DXY21_RS02865 (DXY21_00570)	-	557548..558912 (+)	1365	WP_014304341.1	aspartate kinase	-
DXY21_RS02870	-	558992..559102 (+)	111	WP_369719092.1	YjcZ family sporulation protein	-
DXY21_RS02875 (DXY21_00571)	phrC	559252..559371 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
DXY21_RS02880 (DXY21_00572)	rapC	559355..560503 (-)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
DXY21_RS02885 (DXY21_00573)	-	560656..562089 (-)	1434	WP_162130794.1	sensor histidine kinase	-
DXY21_RS02890 (DXY21_00574)	-	562076..562759 (-)	684	WP_024084885.1	response regulator transcription factor	-
DXY21_RS02895 (DXY21_00575)	-	562972..564408 (+)	1437	WP_076851411.1	ABC transporter permease	-
DXY21_RS02900 (DXY21_00576)	-	564423..565106 (+)	684	WP_070081357.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=310371 DXY21_RS02880 WP_014304340.1 559355..560503(-) (rapC) [Bacillus velezensis strain SRCM101368]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=310371 DXY21_RS02880 WP_014304340.1 559355..560503(-) (rapC) [Bacillus velezensis strain SRCM101368]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCCCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568