Detailed information NTG0310069

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: ES300_RS01260
• Genome accession: NZ_CP038251
• Coordinates: 233506..234504 (+)
• Length: 332 a.a.
• NCBI ID: WP_001810337.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901944
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 228506..239504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES300_RS01240 (ES300_01305)	leuS	228544..231045 (+)	2502	WP_000011794.1	leucine--tRNA ligase	-
ES300_RS01245 (ES300_01310)	-	231345..232037 (+)	693	Protein_249	GNAT family N-acetyltransferase	-
ES300_RS01250 (ES300_01315)	-	232049..232465 (+)	417	Protein_250	GNAT family N-acetyltransferase	-
ES300_RS01255 (ES300_01320)	-	233280..233372 (-)	93	WP_000970381.1	type I toxin-antitoxin system Fst family toxin	-
ES300_RS01260 (ES300_01325)	ruvB	233506..234504 (+)	999	WP_001810337.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ES300_RS01265 (ES300_01330)	-	234485..235057 (+)	573	Protein_253	nucleotidyltransferase family protein	-
ES300_RS01270 (ES300_01335)	-	235288..236046 (+)	759	WP_000466719.1	isoprenyl transferase	-
ES300_RS01275 (ES300_01340)	-	236055..236858 (+)	804	WP_000189857.1	phosphatidate cytidylyltransferase	-
ES300_RS01280 (ES300_01345)	eeP	236880..238139 (+)	1260	WP_000900668.1	RIP metalloprotease RseP	Regulator

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37306.76 Da
• Isoelectric Point: 4.5053

>NTDB_id=310069 ES300_RS01260 WP_001810337.1 233506..234504(+) (ruvB) [Streptococcus pneumoniae strain TVO_1901944]
MSRILDNEMMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DIITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=310069 ES300_RS01260 WP_001810337.1 233506..234504(+) (ruvB) [Streptococcus pneumoniae strain TVO_1901944]
ATGAGTAGAATTTTAGATAATGAGATGATGGGTGATGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTATTTACGTGA
ATATATTGGTCAGGATAAGGTTAAGGATCAGCTTCAGATCTTTATCGAAGCCGCTAAAATGCGGGATGAAGCGCTGGATC
ATGTGCTCTTATTTGGCCCTCCAGGGCTTGGGAAAACAACCATGGCTTTTGTCATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACGTCTGGTCCTGTTATCGAAAAAGCGGGTGATTTGGTAGCGATTTTGAATGAGTTAGAGCCTGGAGATGTCCT
CTTTATTGACGAGATTCATCGCTTACCCATGTCAGTGGAAGAAGTGCTTTATAGTGCCATGGAGGACTTCTACATCGATA
TTATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGAGTTGCCTCCTTTTACCTTGATTGGTGCGACGACTCGG
GCTGGTATGCTCTCAAATCCACTACGGGCACGTTTTGGGATTACAGGTCATATGGAGTATTATGCCCATGCTGACTTGAC
AGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATCACTCATGAGGCAGCATCTGAGTTGGCCCTACGTAGTC
GTGGAACCCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATAATGGGGAATGGGGTAATCGAT
GATATTATTACCGATAAGGCTTTGACTATGCTGGATGTTGACCATGAAGGTTTGGACTATGTGGATCAAAAAATCCTTCG
TACCATGATTGAGATGTACAGTGGAGGACCTGTTGGTCTAGGAACTCTTTCTGTCAATATCGCCGAAGAGCGTGAGACAG
TTGAAGACATGTATGAGCCTTACTTGATTCAAAAAGGTTTTATCATGCGGACACGGTCTGGACGGGTGGCGACTGCTAAG
GCATATGAGCACTTAGGTTATGAATACAGTGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	99.699	100	0.997
ruvB	Streptococcus pneumoniae D39	99.699	100	0.997
ruvB	Streptococcus pneumoniae TIGR4	99.398	100	0.994
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.429	98.193	0.593
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	49.84	94.277	0.47