Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CH624_RS04295 | Genome accession | NZ_CP031682 |
| Coordinates | 816610..817131 (-) | Length | 173 a.a. |
| NCBI ID | WP_005663984.1 | Uniprot ID | A0A0K9LMR6 |
| Organism | Haemophilus influenzae strain P665-7858 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 811610..822131
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH624_RS04260 (CH624_04260) | hpf | 811868..812191 (-) | 324 | WP_005648863.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| CH624_RS04265 (CH624_04265) | bamC | 812364..813011 (-) | 648 | WP_112109915.1 | outer membrane protein assembly factor BamC | - |
| CH624_RS04270 (CH624_04270) | dapA | 813123..814019 (-) | 897 | WP_042611364.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| CH624_RS04275 (CH624_04275) | bcp | 814121..814588 (+) | 468 | WP_112109914.1 | thioredoxin-dependent thiol peroxidase | - |
| CH624_RS04280 (CH624_04280) | exbB | 814731..815183 (+) | 453 | WP_005660631.1 | TonB-system energizer ExbB | - |
| CH624_RS04285 (CH624_04285) | exbD | 815187..815630 (+) | 444 | WP_005656183.1 | TonB system transport protein ExbD | - |
| CH624_RS04290 (CH624_04290) | - | 815640..816425 (+) | 786 | WP_050838132.1 | TonB family protein | - |
| CH624_RS04295 (CH624_04295) | ssb | 816610..817131 (-) | 522 | WP_005663984.1 | single-stranded DNA-binding protein | Machinery gene |
| CH624_RS04300 (CH624_04300) | uvrA | 817284..820115 (+) | 2832 | WP_042611367.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19189.97 Da Isoelectric Point: 5.2649
>NTDB_id=309928 CH624_RS04295 WP_005663984.1 816610..817131(-) (ssb) [Haemophilus influenzae strain P665-7858]
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGSYGNDMGGAPQSSYQARQTNNGGSYQSSRSAPQSATSQPATPQA
EPPMDGFDDDIPF
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGSYGNDMGGAPQSSYQARQTNNGGSYQSSRSAPQSATSQPATPQA
EPPMDGFDDDIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=309928 CH624_RS04295 WP_005663984.1 816610..817131(-) (ssb) [Haemophilus influenzae strain P665-7858]
ATGGCTGGAATTAATAAAGTCATTATTGTAGGTCATTTAGGCAATGATCCTGAAATTCGTACTATGCCAAACGGCGATGC
CGTTGCAAATATTAGCGTAGCAACCAGTGAAAGCTGGAACGATCGTAATACGGGCGAACGCCGTGAAGTAACAGAATGGC
ACCGCATTGTATTTTATCGTCGTCAAGCGGAGATTTGCGGCGAATACTTGCGCAAAGGTTCTCAAGTGTATGTGGAAGGT
CGTTTAAAAACACGTAAATGGCAAGATCAAAATGGTCAAGATCGCTACACTACAGAAATTCAAGGCGATGTAATGCAAAT
GCTTGGTGGACGTAATCAAAACGCAGGTAGTTATGGCAATGATATGGGCGGCGCACCACAATCCTCTTACCAAGCTCGTC
AAACTAACAATGGTGGTAGTTATCAATCATCTCGTTCTGCGCCACAATCAGCCACATCACAACCAGCAACACCACAGGCT
GAGCCACCAATGGACGGATTCGATGACGATATTCCGTTCTAA
ATGGCTGGAATTAATAAAGTCATTATTGTAGGTCATTTAGGCAATGATCCTGAAATTCGTACTATGCCAAACGGCGATGC
CGTTGCAAATATTAGCGTAGCAACCAGTGAAAGCTGGAACGATCGTAATACGGGCGAACGCCGTGAAGTAACAGAATGGC
ACCGCATTGTATTTTATCGTCGTCAAGCGGAGATTTGCGGCGAATACTTGCGCAAAGGTTCTCAAGTGTATGTGGAAGGT
CGTTTAAAAACACGTAAATGGCAAGATCAAAATGGTCAAGATCGCTACACTACAGAAATTCAAGGCGATGTAATGCAAAT
GCTTGGTGGACGTAATCAAAACGCAGGTAGTTATGGCAATGATATGGGCGGCGCACCACAATCCTCTTACCAAGCTCGTC
AAACTAACAATGGTGGTAGTTATCAATCATCTCGTTCTGCGCCACAATCAGCCACATCACAACCAGCAACACCACAGGCT
GAGCCACCAATGGACGGATTCGATGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
65.405 |
100 |
0.699 |
| ssb | Vibrio cholerae strain A1552 |
55.866 |
100 |
0.578 |
| ssb | Neisseria gonorrhoeae MS11 |
50.562 |
100 |
0.52 |
| ssb | Neisseria meningitidis MC58 |
50 |
100 |
0.514 |