Detailed information NTG0309898

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EYQ98_RS09860
• Genome accession: NZ_CP038186
• Coordinates: 1934874..1935860 (+)
• Length: 328 a.a.
• NCBI ID: WP_003181713.1
• Uniprot ID: Q65JQ3
• Organism: Bacillus licheniformis strain MCC 2514
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1929874..1940860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYQ98_RS09845 (EYQ98_09845)	acpP	1930072..1930305 (+)	234	WP_003181706.1	acyl carrier protein	-
EYQ98_RS09850 (EYQ98_09850)	rnc	1930447..1931196 (+)	750	WP_009328527.1	ribonuclease III	-
EYQ98_RS09855 (EYQ98_09855)	smc	1931296..1934857 (+)	3562	Protein_1899	chromosome segregation protein SMC	-
EYQ98_RS09860 (EYQ98_09860)	pilA	1934874..1935860 (+)	987	WP_003181713.1	signal recognition particle-docking protein FtsY	Machinery gene
EYQ98_RS09865 (EYQ98_09865)	-	1935994..1936317 (+)	324	WP_009328526.1	putative DNA-binding protein	-
EYQ98_RS09870 (EYQ98_09870)	ffh	1936333..1937673 (+)	1341	WP_003181717.1	signal recognition particle protein	-
EYQ98_RS09875 (EYQ98_09875)	rpsP	1937781..1938053 (+)	273	WP_003181719.1	30S ribosomal protein S16	-
EYQ98_RS09880 (EYQ98_09880)	-	1938053..1938298 (+)	246	WP_003181721.1	KH domain-containing protein	-
EYQ98_RS09885 (EYQ98_09885)	-	1938436..1938822 (+)	387	WP_003181722.1	YlqD family protein	-
EYQ98_RS09890 (EYQ98_09890)	rimM	1938827..1939351 (+)	525	WP_003181725.1	ribosome maturation factor RimM	-
EYQ98_RS09895 (EYQ98_09895)	trmD	1939348..1940079 (+)	732	WP_003181726.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
EYQ98_RS09900 (EYQ98_09900)	rplS	1940218..1940565 (+)	348	WP_003181728.1	50S ribosomal protein L19	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 36247.39 Da
• Isoelectric Point: 4.8125

>NTDB_id=309898 EYQ98_RS09860 WP_003181713.1 1934874..1935860(+) (pilA) [Bacillus licheniformis strain MCC 2514]
MSFFKKLKEKITQQTDSVSGKFKEGLAKTRNTFQERVNELVSRYRKVDEDFFEELEEVLIGADVGVATVMELIDELKSEV
KRRNIQDPKEVQSVISEKLVEIYEGGEQEASELRVEDGRLNIILFVGVNGVGKTTTIGKLAHQFIKEGKNVVLAAGDTFR
AGAIDQLEVWGERVGAHVVKQAEGSDPAAVIYDAVQAAKARGADVLLCDTAGRLQNKVNLMKELEKVKRVIQREVPDAPH
EVLLVLDATTGQNAMTQAREFSKATDVSGIVLTKLDGTAKGGIVLAIRHELQIPVKFVGLGEKMDDLQPFEAESYVYGLF
SDLIEKEE

Nucleotide

• Length: 987 bp

>NTDB_id=309898 EYQ98_RS09860 WP_003181713.1 1934874..1935860(+) (pilA) [Bacillus licheniformis strain MCC 2514]
ATGAGCTTTTTTAAAAAACTGAAAGAAAAAATCACACAGCAGACCGATTCGGTCTCAGGCAAATTTAAAGAAGGCCTGGC
GAAAACGAGAAATACGTTTCAGGAGCGGGTCAATGAGCTTGTCTCCCGCTACCGGAAAGTGGACGAGGATTTTTTTGAAG
AGCTTGAAGAGGTTCTGATCGGCGCTGATGTCGGCGTTGCGACTGTTATGGAGCTGATTGACGAGCTGAAGAGCGAGGTC
AAGCGAAGAAATATTCAGGACCCGAAAGAGGTGCAGTCCGTCATTTCTGAAAAGCTCGTTGAAATCTATGAAGGCGGGGA
GCAGGAAGCATCAGAGCTCCGCGTCGAAGACGGCCGCCTAAACATCATTTTATTCGTCGGCGTCAACGGCGTCGGCAAAA
CGACGACGATCGGCAAGCTTGCCCATCAATTCATTAAAGAAGGCAAAAATGTCGTTCTTGCTGCCGGAGATACATTCAGG
GCCGGCGCGATCGACCAGCTTGAAGTGTGGGGAGAGCGCGTCGGCGCGCATGTCGTCAAACAGGCGGAAGGCTCGGATCC
TGCGGCTGTTATCTATGACGCCGTTCAAGCCGCGAAAGCGCGCGGCGCCGATGTCCTGCTTTGCGACACGGCAGGACGCC
TGCAAAATAAAGTGAACTTAATGAAAGAGCTAGAAAAGGTAAAGCGCGTGATTCAGCGCGAAGTGCCTGATGCGCCTCAT
GAAGTGCTGCTCGTACTGGATGCGACGACAGGGCAGAACGCAATGACACAGGCGCGCGAATTTTCCAAAGCGACTGATGT
CTCAGGCATCGTGCTGACGAAGCTCGACGGAACGGCAAAAGGCGGCATCGTCCTCGCCATCCGCCATGAGCTGCAGATTC
CGGTCAAGTTTGTCGGGCTGGGGGAAAAAATGGATGACCTGCAGCCGTTTGAAGCAGAGTCATATGTATACGGCCTGTTT
TCCGATCTGATCGAGAAAGAAGAGTAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: Q65JQ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.04	92.073	0.405